| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0459 |
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| Symbol | |
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| ID | 6462160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 445711 |
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| End bp | 447072 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726746 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_002017402 |
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| Protein GI | 194335608 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.240377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC ATAGCAATAA AAAAGTTGCT GCTGTAACAC TTGGATGTAA ACTGAACTAT
GCCGAAACAT CCACTATTCT TGATCAATTG TCCAAAAAAG GCTGGCTGTT ATCGTCGATT
GGGGAGAGAG CAGATCTTAT TATTATTCAT ACCTGTGCAG TGACAAAACA GGCAGAACAG
AAATGTCGTC AAAAAATAAG GGCGATTAAA AGAAAAAATC CCTCCAGCAA AATTGCTGTT
ATTGGTTGTT ATTCCCAGTT CAACCCTGAA GCGCTTTCCG CAATAGATGG AATAGATGCA
ATCCTCGGCA GTAACGATAA ATTTGACATA AAACGATATG AAGATATTCT GCTCGGGACG
GAGCCATCAC CCCTTGTCAG GGTTACGCCA GCCAACACGA TTGAAAAGGT ATACCCAGGC
TATTCACTGC CGGCAGCAGC AAGTTGTGAA CGAACCCGTG CATTTTTGAA AATACAGGAT
GGTTGCGACA ATGGCTGTTC CTACTGTGCA ATTCCCCTGA TCAGGGGAGG GTCACGATCC
CTGCCTGCTG CCCATATTGT CGAGCGAGCC CATCTGCTGG CCTCGTCCGG ATATCGGGAG
ATTGTGCTTA CCGGTGTCAA TACCGGTGAT TATCGTTCTG GAGGCCTCAA GCTGAAAGAG
CTGTTACGCA TGCTTGAAGA GGTCAGTATC AGTCGTATTC GTATCAGCTC CATAGAGCCC
GACATTGTTG ACCGTGAGCT GATTGCACTT GTTGCAGGAT CAAAAAAAAT TGTACCCCAT
TTTCATATTC CCCTTCAAAG TGGTTCCGAC AGAATCCTCA GGGCCATGCG CCGCCATTAC
GATACGGCAC TCTATCGCGA CCGGGTGTTG ATGTCGGTTG AAAACATTGC TGACTGTGCA
ATTGGAGCCG ATGTCATGGT TGGCTATCCA GGAGAAACAG AAGAAGATTT TCTGAAGATG
TACCATTTTA TTGAAGAACT TCCTCTTGCC TCCCTTCATG TGTTCAGTTG TTCAATTCGT
CCCGGAACCC GGCTTGCCCT CCAGATCACA AACAGTGAGC GCAAACCCGT TGAATCCGCA
GAGATCGCCC GGCGCTACAG CGAACTTGCA GAGCTTGGCC GTCGGCATGA AGCCCGCTTC
AAGGCACGTT ATACCGGAAA AGAGTGCATG GTACTCATCG AGCGCTCAAA GCCCGTGGAG
GCGGGGCAGC CCGCATACAG CGGTTATACC CGAAACTACC TCAGAGTCCT GGTTGAGAGC
AACGAAAGCC AATTGCAACA CACCCTTCCA GGAAATGAAG TGCCGGTACG GATCGACTCC
CTCGATGAGG ATTTGAATTT AAAAGGGAGA GTGCTATCTT GA
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| Protein sequence | MKEHSNKKVA AVTLGCKLNY AETSTILDQL SKKGWLLSSI GERADLIIIH TCAVTKQAEQ
KCRQKIRAIK RKNPSSKIAV IGCYSQFNPE ALSAIDGIDA ILGSNDKFDI KRYEDILLGT
EPSPLVRVTP ANTIEKVYPG YSLPAAASCE RTRAFLKIQD GCDNGCSYCA IPLIRGGSRS
LPAAHIVERA HLLASSGYRE IVLTGVNTGD YRSGGLKLKE LLRMLEEVSI SRIRISSIEP
DIVDRELIAL VAGSKKIVPH FHIPLQSGSD RILRAMRRHY DTALYRDRVL MSVENIADCA
IGADVMVGYP GETEEDFLKM YHFIEELPLA SLHVFSCSIR PGTRLALQIT NSERKPVESA
EIARRYSELA ELGRRHEARF KARYTGKECM VLIERSKPVE AGQPAYSGYT RNYLRVLVES
NESQLQHTLP GNEVPVRIDS LDEDLNLKGR VLS
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