| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0406 |
|---|
| Symbol | |
|---|
| ID | 6462315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 390745 |
|---|
| End bp | 391245 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642726693 |
|---|
| Product | Glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_002017351 |
|---|
| Protein GI | 194335557 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0319088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC TGACGGGGAT TAGTCAGATA ACCCTTCGCG TCAATGATTT GCGCAGCGCT
GAAGAATTTT ATGGTGGCAT TCTTGGTCTC AAGCTTGACC ACAGGGTAGG TGCAAACATT
ACCTACCTGC GTATCAATTC TGATCTGCTG GTGCTGGTCA AAGCCGAAAC CCCTGGATCC
CCCGACGCGC GGGATATACG GGTGGATCAT TTTGGATTTC GGCTTGCCTC AGACGCCGAA
GTAGATGCGG CAGCGCTCTA TCTTGATGAG TGTGGCGTGC ATATGGTGAC CCGTCCCGCC
CATCGCAGGG AGGGCAGAGC CTTTTTTGTC ATGGATCCTG ATGGAAATTT GGTCGAATTT
TACTCCATGC ACGAAAGCGG CATACAGGGA GAGAGCATAA AAGATATTGA TTTGCTTGCT
CCCGACTCTT TCGTAACGGG AACCCGTAAA AAGACAAAAA AAGAGACAGA GCAGCAAAAA
CCACGACGCA CCCGAAAATA A
|
|---|
| Protein sequence | MMKLTGISQI TLRVNDLRSA EEFYGGILGL KLDHRVGANI TYLRINSDLL VLVKAETPGS
PDARDIRVDH FGFRLASDAE VDAAALYLDE CGVHMVTRPA HRREGRAFFV MDPDGNLVEF
YSMHESGIQG ESIKDIDLLA PDSFVTGTRK KTKKETEQQK PRRTRK
|
|---|
| |