| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0397 |
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| Symbol | nusA |
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| ID | 6462347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 381840 |
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| End bp | 383384 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726685 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_002017343 |
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| Protein GI | 194335549 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00167375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAGAA AGAAGATAAA AGATGAGGGA CAAGATCGGA GGTTGCAGAT TGCCAGCGCT
TTCGGCGAAA TCGAGCAGTC CAAGATCTTT CTGGATAAAC GCACGGAAAG TGCGGCTGTA
AAAATGGATA TTGCCGATCT CCTTAAGGAT ATTATCCAGA AGCAACTCAG AAAAGACTAT
GATCCCGAAG TTGAATCCAA CATTTTCATC AACCCCGAAC GGGGAGATTT CGAAGTCTAT
ATTCTGAAAA AAATTGTTGA AGAAATAGAT ATAGAGAGCA TCGAGATCAC GCTCAAAGAG
GTAAGAAAAA TTGACGACTC CCTTGAAATT GGAGATTATT ATGAAGAGGG GCCGATCCGC
CTTGAAGACT ATCTGAGTCG CAAATCCATT CAGATTATCA AACAGTCAGT GCAGAAGAAG
GTACGTGACC TTGAACGGCT TGTTGTTTAC GAAGAGTGTC TTGAAAAAGT GGGTGAGATT
GTTGCTGGTG AGGTCTATCA GGTTCGTGCG AATGAAGTTA TTTTCACTTA CAACACATCG
AAAGACCATC GCGTTGAACT GGTGTTGCCG AAGTCAGAGA TGATGAAAAA AGATAATCCG
CGTCGAACCC CGCGGATGAA ACTCTATGTC AAGCGTATTG AGCGTGAGAA AGCAAAAGTG
CGGCTTGATG ATGGCAGTAT GGTTGAACGT GAAAAAGCAG ACGGCGGCAT GAAAGTCATT
GTGTCGAGAG TTGATGACCG TTTTTTATAC AAGCTGTTTG AACACGAAGT TCCGGAAATT
CTTGATGGGC TTATTGTTAT CAAGGCCATT GCACGGGTAC CGGGTGAACG CGCAAAGGTT
GCAGTTGAAT CCACCAGTGC AAGGATAGAC CCGGTTGGAG CAACAGTCGG ATATCGAGGG
AAACGTATTC AAAGCATAGT CAAAGAGCTG AACAACGAAA ATATCGATGT TATCTACTAT
GCCGATGAAC CACAGATTTA TATTTCAAGG GCCATGCAGC CTGCAAAAAT TGATCCTCTT
ACGGTTCATG CCGATGTGAA AACACGGAAA GCAAGGGTAA TGCTCAAGCC CGACCAGATC
AAATATGCTA TTGGAAAGAA TGGGAACAAT ATCCATCTGG CTGAAAAACT GACGGGTTAT
GAAATCGATG TTTATCGTGA TGTGATCGAC AAATCGACGG AAGATCCTAC CGATATTGAT
ATCATTGAGT TCCGTGAAGA GTTTGGTGAT GACATGATTT ACCAGCTTCT TGATGGTGGT
CTCGACACTG CCAAAAAGGT ACTGAAGGCT GGAGTTGATG AAATTGAACT CTCCCTTTTG
GGATCGTCCA AACCCGAAGA GCAGACAGTT TTTGGGAAAA GTTACAAGAC CGGCGTAAAA
CCGAGGGAGC GGAAAGTTAC CGACGAGGAG AAGCGCTATT GGAAGAAGAT TGCTGAAAAT
ATTTATAAAA CCGTAAAGGA ACAGTTTACC GAAGCGGATC TGGAGGCTCT GTTTGATGAT
GAAATTGAGC CTGAAACAGA TGACTTGGCG GTTGAAAAAT CATGA
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| Protein sequence | MVRKKIKDEG QDRRLQIASA FGEIEQSKIF LDKRTESAAV KMDIADLLKD IIQKQLRKDY
DPEVESNIFI NPERGDFEVY ILKKIVEEID IESIEITLKE VRKIDDSLEI GDYYEEGPIR
LEDYLSRKSI QIIKQSVQKK VRDLERLVVY EECLEKVGEI VAGEVYQVRA NEVIFTYNTS
KDHRVELVLP KSEMMKKDNP RRTPRMKLYV KRIEREKAKV RLDDGSMVER EKADGGMKVI
VSRVDDRFLY KLFEHEVPEI LDGLIVIKAI ARVPGERAKV AVESTSARID PVGATVGYRG
KRIQSIVKEL NNENIDVIYY ADEPQIYISR AMQPAKIDPL TVHADVKTRK ARVMLKPDQI
KYAIGKNGNN IHLAEKLTGY EIDVYRDVID KSTEDPTDID IIEFREEFGD DMIYQLLDGG
LDTAKKVLKA GVDEIELSLL GSSKPEEQTV FGKSYKTGVK PRERKVTDEE KRYWKKIAEN
IYKTVKEQFT EADLEALFDD EIEPETDDLA VEKS
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