Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0368 |
Symbol | |
ID | 6462418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 352233 |
End bp | 353240 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642726656 |
Product | bacteriochlorophyll c synthase |
Protein accession | YP_002017314 |
Protein GI | 194335520 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01476] bacteriochlorophyll/chlorophyll synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.259035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTT CCGCAAAACC CGGGTTTACC GATAAAGTAC GAGCACATCT TGAGCTTCTC GATCCTGTTA CCTGGATCAG TGTTTTTCCC TGTCTTGCCG GAGGAGTCAT GGCGTCAGGA GCCATGAAGG GTACGCTTCA CGATTATCTG TTGCTTTTCG CTATTTTTTT GATGTTTGGT CCGCTTGGTA CCGGATTCAG TCAGTCGGTC AATGACTGTT TTGATCTTGA ACTTGACCGG ATCAATGAGC CAACCCGTCC GATTCCTTCA GGTCGTTTGA GTGAAAAAGA GGGATTATGG AACAGTATCA TTGCCCTTTT GCTTGCCATG GGACTTGGAA TATTCATGGG AGTGCATATT GGAGGATATC GTGGCTGGGT TATCGTCTCC TCGATTTTTG CCGCACTTCT TGTCGCCTAC CTCTATTCCG CTCCACCCTT CAAGCTGAAA AAAAATATTC TCACTTCAGC TCCTGCTGTA GGCTTTTCCT ATGGTTTTGT CTCGTTTATA TCAGCAAACG CCCTGTTCGG CGATATCCGT CCGGAAGCGA TCTGGCTTGC CAGTCTGAAC TTTTTCATGG CGGTAGCCTT GATTATCCTC AATGACTTCA AGTCGGCAGA AGGTGACAAG GATGGTGGGC TCAAGTCACT GACAGTCATG ATCGGTGCAA AAAAAACGTT TCTGGTCTCT TTTATTATTA TTGACCTTGT TTTTTCTGTT CTTGCTTACC TCTCGTATTC ATGGGGGTTT ATGATTCCCG CGTTTTTTGT TCTGATTGGC CTTGTTTTGA ATCTGGTTCT TCAGGTTCAG CTTTTGCGAG ATCCGAAGGG TGGAATTTCG TTCTTGCAGG GAGCCGTTGA TGATGGATTC GGCAATGCAA TCGGCAAGAG TGATATTCAG GAACACAACA CCTTTCTCCG GTTTCAGGTT GCCAATAACA TTCTCTTTTT ACTCAACAAT CTGCTTGTTG CCGGTATGGT TGGATTGAAG TATATCACTG TTCAATAA
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Protein sequence | MAVSAKPGFT DKVRAHLELL DPVTWISVFP CLAGGVMASG AMKGTLHDYL LLFAIFLMFG PLGTGFSQSV NDCFDLELDR INEPTRPIPS GRLSEKEGLW NSIIALLLAM GLGIFMGVHI GGYRGWVIVS SIFAALLVAY LYSAPPFKLK KNILTSAPAV GFSYGFVSFI SANALFGDIR PEAIWLASLN FFMAVALIIL NDFKSAEGDK DGGLKSLTVM IGAKKTFLVS FIIIDLVFSV LAYLSYSWGF MIPAFFVLIG LVLNLVLQVQ LLRDPKGGIS FLQGAVDDGF GNAIGKSDIQ EHNTFLRFQV ANNILFLLNN LLVAGMVGLK YITVQ
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