Gene Ppha_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0333 
Symbol 
ID6462612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp318524 
End bp321166 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content51% 
IMG OID642726625 
Producthypothetical protein 
Protein accessionYP_002017283 
Protein GI194335489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACACC GGACGATTAA CCGCACGCTT GCCGTCTCTC TTTTTCTTGC TGCTGAAATT 
TTATATCTCC GTACCATGGC TCCCACCTTT TCGTTCTGGG ATTGCGGGGA GTTTATTGCC
ACAGCTTATA CCCTCGGGAT TCCTCACCCT CCCGGAGCGC CGCTTTTTCT TCTGCTTGGG
CGTCTTTTTT CCATGATTCC TTTTTTCGGT GATATTGGCG CGAGGGTTAA CTTGATCAGC
ACACTCGCCA GTGCCGCAAC CATCATGCTG ACCTACCTCA TCACGGTAAG GCTGATCATC
ATGTATCGCA AACGTGATCC CGACCTCTGG AGCCCGGCTG AAAAAGTATC GGCTTACGGT
GGAGCTGTTA TCGGCGCTCT TGCCCTTGCC CTCTCCGACA GTTTCTGGTT CAACGCTGTT
GAAGCTGAGG TTTACGCACT CTCTTCGCTT TTTACAGCAT TGGTTGTCTG GCTCATCCTC
CGCTGGTATG AAGAGGAGCC AAAACCCGGT CATGAACGGT GGCTCTTGCT TGTCATGTAC
ATTATTGGCC TTTCGATCGG TGTGCACCTG CTCAGCCTGC TTGCCGTTTT TGCTGTTGCA
CTGGTCTACT ACTTCAAAAA ATATGATGTC ACGGTTAAAT CTTTTGCCCT GCTTATGGTC
GCCTCATCGG GGCTTTTTTT CCTGATCTAT ATTGGAATTA TCAAAGGGCT TCCGATTCTG
CTGCAACTGA CCTCATGGTG GGGATTTCTC CTTTTCCTTG CCCTGCTTGC CTATGCCACG
TGGTATTCGC ACCTGCATCG CAAGGCGCTC ATGAACACCC TTCTGATGTC GCTGTTTCTG
ATCATTATTG GGTATACCTC CTACGGCATG ATCTTCGTAC GGGCGCAGGC AGGCCCACCC
ATAAACGAAA ACAATCCCTC CTCGTCCGAA ACCTTTTTCT CGTACCTCAA CCGTGATCAG
TATGGTGATA TGCCGCTCTG GCCGAGACGG TGGTCAACCG AGCCGGTACA TCAATATTTT
TACCAGCACT ACTCAAGTGA TCTCGACTAT TTCCTCACCT ACCAGATGCA GAAGATGTAC
TTCCGCTATT TCGGCTGGCA GTTCATCGGA CGTGAAAACG ATATGGAGGG TTCAGGAGTG
GACTGGTCGG TGCTCTGGGG TATTCCTTTT CTTGTGGGAG TGGCTGGAGC GATCACCCAT
TTCAGGCGCG AGTGGAAGAT GGGGCTGGTT GTTACCGCGC TTTTTGTGCT GACCGGAGCA
GCGCTTGTTA TCTATCTCAA CCAGACAGAA CCTCAGCCGA GAGAGCGGGA TTACAGTTAT
GCAGGCAGTT TTTTTGCCTT CGCCCTCTGG ATAGGAATAG GTGTTGAGAG TATCTGGCAG
TGGCTTGCAA AGCGGTCGAA GTCTGGCGTT CCCGGAAACC AGATGCTGTT TGCCGTGCTT
ACGGTTACAG CCGGTTTGCT TTTTATCAAC GCCCGGATGC TGCAGGCAAA CTACCGGGTG
CACGACCGCT CGGGAAACTT TGTTCCTTGG GACTGGGCAT GGAATATGCT CCAGAGCTGT
GAAAAAGATG CCATACTGTT TACCAACGGA GATAACGATA CCTTCCCTTT GTGGTACCTG
CAGGAGGTCG AACGGATCAG GACGGATGTT CGTGTCGTCA ATCTGAGCCT TGCCAATACC
GGTTGGTATC TCGACCAGTT AAAAAACAGC AGCCCTCGCG GAGCAAAGCC GGTGGCGTTC
ACCATGAGTG ACGGTGAAAT TGCCGGTATT ACCTATGTAC CCATTGATTC TGTTGATGCC
GAGCTTCCCT CACAGGATGC CCGTCAGCAG CTCCTGCGTA ATGCCCGTCT CCACGGCCAG
TCGCTCCCCT CAGAACCACT TGGCACCATG AAATGGCTCC TCAAGCCTGG ATTGACCTAC
GATGGCCAGG GCTACCTTCG GCCACAGGAT ATTGCTGTTT ATGAGATTCT GATGAACAAC
TTTTCCCGGC GTCCGATCTA CTTTGCCCTG ACGGTTGATC CCGAAAGCAT GATTGGTCTT
CAAAATTACC TCCGTCTTGA TGGCCTTGCC TACCGGGTCG TTCCGATTAA AAGCGTCGAT
CCGATGAGCT ATGTAGATTC TGCGCTGCTC TACAGAAACC TTGTTGGGCT CTATCGCTAC
CGAAACCTTA ATAATACCGC CATTAACCTT GAAGAGACCT CAAGGAGGCT TTGTGGCAAC
TATACGCCTC TGTTTGTCCG CCTTGCCCTT GAACTGGCTG CCGAGCCTGA AGGCCAGCTT
ACCATACCGG ATGCTTCGGG AAAGGAGAAG ATTTACCATC GGGGAGCGCT TGCGCTGCAG
GTTCTTGACA CTTCGTCCAA ACTGCTTCCT CTTGCACAGT ATCCCCTGAA CCCCGAACTT
GCAGGATCCG TGATCGCACT CTATGTCCGT CTTGGTGAAA AGCAGAAAAG CTCACCGTAT
ATTAGCTATC TTGAAAAACT AAGCCGTCAG TCATCATCGC TTTCTGATCC TCGCCTCTTC
TATGTTCTTG CAAGGGCCTA TCGCGATATT GGCAGAAATG AGGATGCGAA ACGCATTATT
GTATTGCTTG CCAGAGAATT GAAACAACCA GGACTGGTAG ACGAGTTTGA AACCATGAAG
TAA
 
Protein sequence
MIHRTINRTL AVSLFLAAEI LYLRTMAPTF SFWDCGEFIA TAYTLGIPHP PGAPLFLLLG 
RLFSMIPFFG DIGARVNLIS TLASAATIML TYLITVRLII MYRKRDPDLW SPAEKVSAYG
GAVIGALALA LSDSFWFNAV EAEVYALSSL FTALVVWLIL RWYEEEPKPG HERWLLLVMY
IIGLSIGVHL LSLLAVFAVA LVYYFKKYDV TVKSFALLMV ASSGLFFLIY IGIIKGLPIL
LQLTSWWGFL LFLALLAYAT WYSHLHRKAL MNTLLMSLFL IIIGYTSYGM IFVRAQAGPP
INENNPSSSE TFFSYLNRDQ YGDMPLWPRR WSTEPVHQYF YQHYSSDLDY FLTYQMQKMY
FRYFGWQFIG RENDMEGSGV DWSVLWGIPF LVGVAGAITH FRREWKMGLV VTALFVLTGA
ALVIYLNQTE PQPRERDYSY AGSFFAFALW IGIGVESIWQ WLAKRSKSGV PGNQMLFAVL
TVTAGLLFIN ARMLQANYRV HDRSGNFVPW DWAWNMLQSC EKDAILFTNG DNDTFPLWYL
QEVERIRTDV RVVNLSLANT GWYLDQLKNS SPRGAKPVAF TMSDGEIAGI TYVPIDSVDA
ELPSQDARQQ LLRNARLHGQ SLPSEPLGTM KWLLKPGLTY DGQGYLRPQD IAVYEILMNN
FSRRPIYFAL TVDPESMIGL QNYLRLDGLA YRVVPIKSVD PMSYVDSALL YRNLVGLYRY
RNLNNTAINL EETSRRLCGN YTPLFVRLAL ELAAEPEGQL TIPDASGKEK IYHRGALALQ
VLDTSSKLLP LAQYPLNPEL AGSVIALYVR LGEKQKSSPY ISYLEKLSRQ SSSLSDPRLF
YVLARAYRDI GRNEDAKRII VLLARELKQP GLVDEFETMK