Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0333 |
Symbol | |
ID | 6462612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 318524 |
End bp | 321166 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726625 |
Product | hypothetical protein |
Protein accession | YP_002017283 |
Protein GI | 194335489 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACACC GGACGATTAA CCGCACGCTT GCCGTCTCTC TTTTTCTTGC TGCTGAAATT TTATATCTCC GTACCATGGC TCCCACCTTT TCGTTCTGGG ATTGCGGGGA GTTTATTGCC ACAGCTTATA CCCTCGGGAT TCCTCACCCT CCCGGAGCGC CGCTTTTTCT TCTGCTTGGG CGTCTTTTTT CCATGATTCC TTTTTTCGGT GATATTGGCG CGAGGGTTAA CTTGATCAGC ACACTCGCCA GTGCCGCAAC CATCATGCTG ACCTACCTCA TCACGGTAAG GCTGATCATC ATGTATCGCA AACGTGATCC CGACCTCTGG AGCCCGGCTG AAAAAGTATC GGCTTACGGT GGAGCTGTTA TCGGCGCTCT TGCCCTTGCC CTCTCCGACA GTTTCTGGTT CAACGCTGTT GAAGCTGAGG TTTACGCACT CTCTTCGCTT TTTACAGCAT TGGTTGTCTG GCTCATCCTC CGCTGGTATG AAGAGGAGCC AAAACCCGGT CATGAACGGT GGCTCTTGCT TGTCATGTAC ATTATTGGCC TTTCGATCGG TGTGCACCTG CTCAGCCTGC TTGCCGTTTT TGCTGTTGCA CTGGTCTACT ACTTCAAAAA ATATGATGTC ACGGTTAAAT CTTTTGCCCT GCTTATGGTC GCCTCATCGG GGCTTTTTTT CCTGATCTAT ATTGGAATTA TCAAAGGGCT TCCGATTCTG CTGCAACTGA CCTCATGGTG GGGATTTCTC CTTTTCCTTG CCCTGCTTGC CTATGCCACG TGGTATTCGC ACCTGCATCG CAAGGCGCTC ATGAACACCC TTCTGATGTC GCTGTTTCTG ATCATTATTG GGTATACCTC CTACGGCATG ATCTTCGTAC GGGCGCAGGC AGGCCCACCC ATAAACGAAA ACAATCCCTC CTCGTCCGAA ACCTTTTTCT CGTACCTCAA CCGTGATCAG TATGGTGATA TGCCGCTCTG GCCGAGACGG TGGTCAACCG AGCCGGTACA TCAATATTTT TACCAGCACT ACTCAAGTGA TCTCGACTAT TTCCTCACCT ACCAGATGCA GAAGATGTAC TTCCGCTATT TCGGCTGGCA GTTCATCGGA CGTGAAAACG ATATGGAGGG TTCAGGAGTG GACTGGTCGG TGCTCTGGGG TATTCCTTTT CTTGTGGGAG TGGCTGGAGC GATCACCCAT TTCAGGCGCG AGTGGAAGAT GGGGCTGGTT GTTACCGCGC TTTTTGTGCT GACCGGAGCA GCGCTTGTTA TCTATCTCAA CCAGACAGAA CCTCAGCCGA GAGAGCGGGA TTACAGTTAT GCAGGCAGTT TTTTTGCCTT CGCCCTCTGG ATAGGAATAG GTGTTGAGAG TATCTGGCAG TGGCTTGCAA AGCGGTCGAA GTCTGGCGTT CCCGGAAACC AGATGCTGTT TGCCGTGCTT ACGGTTACAG CCGGTTTGCT TTTTATCAAC GCCCGGATGC TGCAGGCAAA CTACCGGGTG CACGACCGCT CGGGAAACTT TGTTCCTTGG GACTGGGCAT GGAATATGCT CCAGAGCTGT GAAAAAGATG CCATACTGTT TACCAACGGA GATAACGATA CCTTCCCTTT GTGGTACCTG CAGGAGGTCG AACGGATCAG GACGGATGTT CGTGTCGTCA ATCTGAGCCT TGCCAATACC GGTTGGTATC TCGACCAGTT AAAAAACAGC AGCCCTCGCG GAGCAAAGCC GGTGGCGTTC ACCATGAGTG ACGGTGAAAT TGCCGGTATT ACCTATGTAC CCATTGATTC TGTTGATGCC GAGCTTCCCT CACAGGATGC CCGTCAGCAG CTCCTGCGTA ATGCCCGTCT CCACGGCCAG TCGCTCCCCT CAGAACCACT TGGCACCATG AAATGGCTCC TCAAGCCTGG ATTGACCTAC GATGGCCAGG GCTACCTTCG GCCACAGGAT ATTGCTGTTT ATGAGATTCT GATGAACAAC TTTTCCCGGC GTCCGATCTA CTTTGCCCTG ACGGTTGATC CCGAAAGCAT GATTGGTCTT CAAAATTACC TCCGTCTTGA TGGCCTTGCC TACCGGGTCG TTCCGATTAA AAGCGTCGAT CCGATGAGCT ATGTAGATTC TGCGCTGCTC TACAGAAACC TTGTTGGGCT CTATCGCTAC CGAAACCTTA ATAATACCGC CATTAACCTT GAAGAGACCT CAAGGAGGCT TTGTGGCAAC TATACGCCTC TGTTTGTCCG CCTTGCCCTT GAACTGGCTG CCGAGCCTGA AGGCCAGCTT ACCATACCGG ATGCTTCGGG AAAGGAGAAG ATTTACCATC GGGGAGCGCT TGCGCTGCAG GTTCTTGACA CTTCGTCCAA ACTGCTTCCT CTTGCACAGT ATCCCCTGAA CCCCGAACTT GCAGGATCCG TGATCGCACT CTATGTCCGT CTTGGTGAAA AGCAGAAAAG CTCACCGTAT ATTAGCTATC TTGAAAAACT AAGCCGTCAG TCATCATCGC TTTCTGATCC TCGCCTCTTC TATGTTCTTG CAAGGGCCTA TCGCGATATT GGCAGAAATG AGGATGCGAA ACGCATTATT GTATTGCTTG CCAGAGAATT GAAACAACCA GGACTGGTAG ACGAGTTTGA AACCATGAAG TAA
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Protein sequence | MIHRTINRTL AVSLFLAAEI LYLRTMAPTF SFWDCGEFIA TAYTLGIPHP PGAPLFLLLG RLFSMIPFFG DIGARVNLIS TLASAATIML TYLITVRLII MYRKRDPDLW SPAEKVSAYG GAVIGALALA LSDSFWFNAV EAEVYALSSL FTALVVWLIL RWYEEEPKPG HERWLLLVMY IIGLSIGVHL LSLLAVFAVA LVYYFKKYDV TVKSFALLMV ASSGLFFLIY IGIIKGLPIL LQLTSWWGFL LFLALLAYAT WYSHLHRKAL MNTLLMSLFL IIIGYTSYGM IFVRAQAGPP INENNPSSSE TFFSYLNRDQ YGDMPLWPRR WSTEPVHQYF YQHYSSDLDY FLTYQMQKMY FRYFGWQFIG RENDMEGSGV DWSVLWGIPF LVGVAGAITH FRREWKMGLV VTALFVLTGA ALVIYLNQTE PQPRERDYSY AGSFFAFALW IGIGVESIWQ WLAKRSKSGV PGNQMLFAVL TVTAGLLFIN ARMLQANYRV HDRSGNFVPW DWAWNMLQSC EKDAILFTNG DNDTFPLWYL QEVERIRTDV RVVNLSLANT GWYLDQLKNS SPRGAKPVAF TMSDGEIAGI TYVPIDSVDA ELPSQDARQQ LLRNARLHGQ SLPSEPLGTM KWLLKPGLTY DGQGYLRPQD IAVYEILMNN FSRRPIYFAL TVDPESMIGL QNYLRLDGLA YRVVPIKSVD PMSYVDSALL YRNLVGLYRY RNLNNTAINL EETSRRLCGN YTPLFVRLAL ELAAEPEGQL TIPDASGKEK IYHRGALALQ VLDTSSKLLP LAQYPLNPEL AGSVIALYVR LGEKQKSSPY ISYLEKLSRQ SSSLSDPRLF YVLARAYRDI GRNEDAKRII VLLARELKQP GLVDEFETMK
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