| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0325 |
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| Symbol | |
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| ID | 6462308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 310211 |
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| End bp | 311818 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726617 |
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| Product | light-independent protochlorophyllide reductase subunit B |
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| Protein accession | YP_002017275 |
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| Protein GI | 194335481 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00842285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAG CTTTCTGGCT CTACGAGGGC ACCGCCCTTC ACGGTATCAG CCGAGTAACC
AACAGTATGA AAGGGGTTCA CACCGTTTAT CATGCTCCCC AGGGGGACGA TTACATTACG
GCAACCTATA CCATGCTCGA GCGAACCCCA CAATTTCCCG GCTTATCGAT CAGTGTTGTT
CGTGGAAGAG ACCTTGCCCA GGGAGTATCA AGACTACCCT CGACACTCCA GCAGGTCGAA
CACCATTACC ATCCTGAACT TATTGTCATC GCACCGAGTT GCAGCACAGC CCTTCTTCAG
GAAGATCTCC ATCAACTTGC AGCCCACTCG GGCCTGCCGC AGGAGAAAAT TCTGGTCTAT
GCGCTCAACC CATTCAGAGT ATCGGAAAAT GAGGCGGCAG ATGGTCTGCT GACCGAACTG
GTCAAACGTT TTGCTTCTCC CCAGGAGAAA ACAGCACAGC CATCGGTGAA CCTCCTTGGC
TTTACCTCGC TCGGATTTCA CTTGCGTGCC AACCTGACCA GCATCCGTCG CATGTTGCAG
ACGCTTGGCA TTGCGGTCAA TGTTGTTGCT CCCTGGGGAG CCAGCATCGA TGATCTCCGG
AAACTTCCAG CCGCCTGGCT CAATATTGCC CCTTACCGTG AGATCGGTTC AACGGCAGCG
GAATATCTTG CTGATGCATT CGCTATGCCA GCGCTTTATG AAGCCCCGAT CGGAGTCGAA
CCTACCCTTG CATGGCTTCG CTCCCTGATC GAGAAGCTTA ACGCAGCGGG CGCTGAACGG
GGAGTTGCTC CGATTGTCAT GCCGCAACTC AACGCATTCT CGCTCGACGG CCTGAGCGCT
CCAAGCGGTG TTCCCTGGTT TGCCAGAACT GCCGATATGG AAAGTTTCAG CAATAAACGT
GCCTTTGTGT TCGGTGATGC CACGCATACC GTCGCCCTCG TCAAGTTTCT GCGTGACGAA
CTTGGTATGC AGATCATCGG TGCGGGCACC TATCTGGAAC GTCATGCCGA TTGGGTGCGC
AAAGAGCTTG AAGGCTACCT TCCCGGAGCG CTTATCGTAA CCGACAAGTT CCAGGATGTT
GCACAAATTA TTGATGATCA AATGCCGGAT CTGGTCTGCG GTACGCAGAT GGAACGGCAC
AGTTGCCGCA AGCTCGATGT TCCCTGCATG GTGGTCTGTC CACCGACCCA TATTGAAAAC
CACCTGCTTG GCTATTATCC CTTCTTTGGA TTTGATGGAG CTGATGTTAT TGCCGACAGG
GTCTATCTTT CCTGCAAACT CGGTTTGGAA AAGCATCTGA TCGACTTTTT CGGTGATGCG
GGTCTTGAGT ACGAAGAGCC CGAAGTATCC GCCCCTTCTG AAGAACCTGT GGCACTCTCC
GTCGCCCCTA ATGATCATCC TTCACCGGAG GCTGCAGCAG AGGCTGTAGT GATTGCAGAG
GAGGGAGAGA TGAAGTGGAG CGATGAGGCT GAAACCATGC TGAAAAAGGT ACCCTTCTTT
GTCCGTAAAA AGGTCAGGAA AAACACCGAA ACTTTTGCCC GCGCGAGTGG TGCATCCATG
ATCTCCGTTG ATGTGTTCCG ACAGGCAAAA GAGTCGCTGG GTGGTTAA
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| Protein sequence | MRLAFWLYEG TALHGISRVT NSMKGVHTVY HAPQGDDYIT ATYTMLERTP QFPGLSISVV
RGRDLAQGVS RLPSTLQQVE HHYHPELIVI APSCSTALLQ EDLHQLAAHS GLPQEKILVY
ALNPFRVSEN EAADGLLTEL VKRFASPQEK TAQPSVNLLG FTSLGFHLRA NLTSIRRMLQ
TLGIAVNVVA PWGASIDDLR KLPAAWLNIA PYREIGSTAA EYLADAFAMP ALYEAPIGVE
PTLAWLRSLI EKLNAAGAER GVAPIVMPQL NAFSLDGLSA PSGVPWFART ADMESFSNKR
AFVFGDATHT VALVKFLRDE LGMQIIGAGT YLERHADWVR KELEGYLPGA LIVTDKFQDV
AQIIDDQMPD LVCGTQMERH SCRKLDVPCM VVCPPTHIEN HLLGYYPFFG FDGADVIADR
VYLSCKLGLE KHLIDFFGDA GLEYEEPEVS APSEEPVALS VAPNDHPSPE AAAEAVVIAE
EGEMKWSDEA ETMLKKVPFF VRKKVRKNTE TFARASGASM ISVDVFRQAK ESLGG
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