| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0273 |
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| Symbol | |
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| ID | 6461616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 267515 |
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| End bp | 268543 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726566 |
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| Product | TIR protein |
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| Protein accession | YP_002017225 |
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| Protein GI | 194335431 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAG TATTCATCAG TTATAGTTGG ATCGACGAAT TCGATCCGGT ACAGAACCGG
TGGGGTCGCG TGCCTAATCC CAGAGTGAGA GAACTCGCCG ATCGTTTACG CAACGATGGT
GTAGATGTCA GACTTGATAT CTACTTTCGC GATGGTCTCC ACGGCTTTTC TCAGCCACAG
CCAATACCTG GCAATCCTCA GGATCCTTGG CTTGCTTGGT CGGCTCAGCA GATCGCAGAA
GCCGATTCAG TATTGCTCTT TTGCACGCCC GAGTATGCCT ACTCGGATCC CGCGCACCGT
ATGTTCAATG GCGAATGGTC TGACTGGTCT CAACTGAACG AAACTACCAG AATCGATCGG
CAACACGACG TTCCCTTTCG CTGGTGGGAC TGGTATGCGA TCAATCGAGA GTCGTCCGAA
CGACCAGAGA AATTCATTCT GATCGGTCTC GGACACTACC ACAGGGATCA AATGCCACCT
GTAAACCACG GCGCCAGCTA CACTGACATC GCAACCGAAG CTGGCTATAA CACACTTCTG
ATGCGTATCC TCCAGGTCTG GCATAGGCGC GTTCCACGCC AGGGGATCTT CATCAGCTAC
GCTCATAACG ACGGTGACCA CTGGTTACAG ATGCTACGCG TTCACCTTTC GTGGCTCGAA
CGCAACCATG GCGTTGAGAT CTGGAGTGAC CAGAACATAC AGCCCGGGCA GAAATGGCGC
AGAAGTATCC AAGAAGCACT TCATCGGGCG AAGGTGGCCG TACTTCTCGT ATCAGAAAAC
TTCTTGAACT CCGACTTCAT TACAAACAGC GAGTTACCGA AAATGCTTCA GGCGGCTGAA
TCTGATGGCG TGACGATCTT TTGGATTCCT GTCCGCTCCT CTTCATACAG GCAAAGCCCG
ATCAGTGAAT TCCAGTCGGC ACATCCACCT GAGAAACCAT TATCAAGCTT ACCCGCTCCC
GAGCAAGACC AAGCATTCGT TGCCATCGCC GAGAAGCTCG CAGCAATCCT CGGGCTTGTT
GAACGTTAG
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| Protein sequence | MAVVFISYSW IDEFDPVQNR WGRVPNPRVR ELADRLRNDG VDVRLDIYFR DGLHGFSQPQ
PIPGNPQDPW LAWSAQQIAE ADSVLLFCTP EYAYSDPAHR MFNGEWSDWS QLNETTRIDR
QHDVPFRWWD WYAINRESSE RPEKFILIGL GHYHRDQMPP VNHGASYTDI ATEAGYNTLL
MRILQVWHRR VPRQGIFISY AHNDGDHWLQ MLRVHLSWLE RNHGVEIWSD QNIQPGQKWR
RSIQEALHRA KVAVLLVSEN FLNSDFITNS ELPKMLQAAE SDGVTIFWIP VRSSSYRQSP
ISEFQSAHPP EKPLSSLPAP EQDQAFVAIA EKLAAILGLV ER
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