Gene Ppha_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0256 
Symbol 
ID6462557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp249633 
End bp250472 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID642726550 
Productglycosyl transferase family 2 
Protein accessionYP_002017209 
Protein GI194335415 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTC CGTTGAGCTG CATCGTGGTG CTGAACTGGA ACGGCGCAAA GGATACGCTT 
GCCTGTCTGG ATTCGCTTGC GGCACTGATC TCACCATCCT GCAGGGTGCT TGTTGTCGAT
AATGGATCGA CTGATGGCTC TCCGGAAAAG ATACGGGAGC GCTTTCCGGC TGTTGAGCTT
CTTCTCCTGC CGGTCAATAT CGGCTATGCT GGGGGCAACA ATGCCGGATT CAGAAGGGTT
ATGGAGCTGA AGGCTGAATT CGTGATCTTT CTGAACAACG ATACTCTTGT GGAGAGCAGT
TTTTATACTC CATTGATCGA TACCCTGCAG TGCAACCCTG GGGCAGGAAT AGCCGTACCG
AAAATTTATT ATTCGGATCG TCCGGAGAGG CTCTGGTACG CCGGTGGTGT TGTCAACCTT
TCGACCGGCC TTATCCGCCA TGTCGGGTTG CGGAAAAAAG ATGCTCCCGA TTTTGATCGT
CCGGCTCTTA CCGGTTACGC TACAGGCTGC TGTTTCGCAA TGCGTTGTCG TGATTTCGAT
AGTGTTGGCG GGTTTGATGA AACGTTCGGG ATGTATGCCG AGGATGTCGA TCTCTCCCTG
CGGGTTCGCG CTCGGGGTAT GAGTATCAAT TATGTGCCCT CCTCAAGGGT CTGGCACAAG
GTTTCGGCGT CGCTTTCCGG CAGACCGCTG CGGAAACTGC TCAAGAAAAG TATCGGGGCA
CTTCATCTTT TCAGAAAGCA CCGGGCATGG AGCGGTATGG TGCTCTATCT GCTTCTGCTT
CCCCTGCGTC TTGCCGGCAG TTTTGGTGAA GAGTTGAGGG AAAAAAAGTC CACAACATAA
 
Protein sequence
MTSPLSCIVV LNWNGAKDTL ACLDSLAALI SPSCRVLVVD NGSTDGSPEK IRERFPAVEL 
LLLPVNIGYA GGNNAGFRRV MELKAEFVIF LNNDTLVESS FYTPLIDTLQ CNPGAGIAVP
KIYYSDRPER LWYAGGVVNL STGLIRHVGL RKKDAPDFDR PALTGYATGC CFAMRCRDFD
SVGGFDETFG MYAEDVDLSL RVRARGMSIN YVPSSRVWHK VSASLSGRPL RKLLKKSIGA
LHLFRKHRAW SGMVLYLLLL PLRLAGSFGE ELREKKSTT