Gene Ppha_0252 details

Gene Information

• Locus tag: Ppha_0252
• Symbol: obgE
• ID: 6460929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 246711
• End bp: 247724
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642726546
• Product: GTPase ObgE
• Protein accession: YP_002017205
• Protein GI: 194335411
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0998753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGTTTG TTGATAGTGC GTCGATTTTT GTTCATGCTG GAGACGGCGG AAAAGGGTGT 
GTCAGTTTTC GGAGGGAGAA GTTTGTGCCA AAAGGTGGCC CGGATGGTGG AGATGGCGGT 
CGGGGAGGCC ATGTATGGCT GAGAACCAAT CGGCAGTTGA CCACTCTTCT CGATTTCAAA 
TATAAAAAGA AGTATATCGC TGTTCGCGGT GTGCATGGTC AGGGCGCCCG TAAAACAGGC 
AGGGATGGGG CCGATGTTGT TATTGATGTC CCCTGCGGTA CCATTGTCAG AAATGGTGAA 
ACCAACGAAA TTATTGCCGA CCTGACTGGC GAGGATCAGG AAATCTTGAT TGCGAGAGGT 
GGCAAAGGGG GGCGGGGAAA CCAGCACTTC GCAACACCAA CCCGACAGGC GCCCCGATAT 
GCCGAGCCGG GTCAGAAGGG TGAGCTGCTT ATGCTCAACA TGGAGTTGAA GCTTATGGCT 
GATGTTGGTC TGGTTGGATT TCCCAATGCG GGCAAGTCAA CACTGATTTC GGTGATCAGC 
GCGGCCAAGC CAAAAATTGC CGATTATCCC TTTACAACAC TGGTTCCCAA TTTGGGCATT 
GTGCGCTACG AGGAGTACAA ATCGTTTGTG ATGGCTGATA TTCCGGGAAT TATCGAGGGT 
GCGGCAGAGG GAAAAGGGCT AGGTCTCCAG TTTCTTCGTC ATATTGAGCG TACAAAAATA 
CTTGCCATTC TTATTGCGGC TGATTCACCT GATATTGCTG ATGAATATCA TACCCTTCTT 
GGGGAGCTTG AAAAATTTGA GAAGGAACTG CTCGATAAAC CAAGGTTAGT GGTTGTGACG 
AAAATGGATA TTGCCGCTGA AGATCTTGAA ATTCCCACGC TTGAGGAGGG AGTCAGGGTT 
CTTTCGATTT CAGCCGTATC CGGCCAGGGG CTTAAAGAGC TCAAGGATGA ACTCTGGAGA 
GAGGTTTCGG GTCGTATCAG GGCTGCAGAA CCGTTGGATG AGAGTCTCGG CTGA 

 

Protein sequence

MKFVDSASIF VHAGDGGKGC VSFRREKFVP KGGPDGGDGG RGGHVWLRTN RQLTTLLDFK 
YKKKYIAVRG VHGQGARKTG RDGADVVIDV PCGTIVRNGE TNEIIADLTG EDQEILIARG 
GKGGRGNQHF ATPTRQAPRY AEPGQKGELL MLNMELKLMA DVGLVGFPNA GKSTLISVIS 
AAKPKIADYP FTTLVPNLGI VRYEEYKSFV MADIPGIIEG AAEGKGLGLQ FLRHIERTKI 
LAILIAADSP DIADEYHTLL GELEKFEKEL LDKPRLVVVT KMDIAAEDLE IPTLEEGVRV 
LSISAVSGQG LKELKDELWR EVSGRIRAAE PLDESLG