Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0250 |
Symbol | gatB |
ID | 6462468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 244949 |
End bp | 246376 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642726544 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_002017203 |
Protein GI | 194335409 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0127407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTATG AATTAGTGGT GGGCCTTGAG GTGCATTGTC AGCTCAATAC CACAAGCAAA GCCTTCTGTG GCTGTTCGGC GAAGTTCGGC AAGTCGGCCA ATACCAATGT ATGTCCTGTC TGTCTCGCTC TTCCCGGAGC GCTGCCGGTT CTTAACCGTC GTGTTGTTGA AGATGCCGTG AAGCTTGGTC TTGCAACGGG TTGCTCTATA GCGCCCCACT CAGTGCTTGC CCGGAAAAAC TATTTTTACC CTGATTTGCC GAAAGGGTAC CAGATTTCGC AGTTTGAAGA ACCGATATGC AGCGAAGGGA TGGTGCACAT TGATGCCGGA GAGGGTAATC GGGAGATTCG ACTGATCAGG ATTCATATTG AGGAGGACGC CGGAAAATCA ATTCATGATA TCGGTGAGGA GACCTATATC GATCTCAACC GGAGTGGTGT CCCTTTGCTT GAAATTGTAA GTTATCCTGA CCTGCGCACT TCGAAAGAGG CGTCAGCTTA TCTGCAGAAG GTACGCCAGA TCGTCAAATA TCTTGGTATC TCGGATGGCA ACATGGAGGA GGGAAGTCTT CGCTGTGATG CAAACGTCTC TTTGCGGCCA GTCGGGGAGA CGGAGTATGG TACCCGTACT GAGATCAAGA ATATGAACTC TTTCAAGAAT GTTGAAAAGG CAATCGATTA CGAGGTCGAG CGTCATCGTG AGATTCTTGA AGCCGGTGGG GTTATTCTGC AGGAGACCCG TCTCTGGGAT GCCGACAAGG GGGAGACCCG TTCCATGCGC GGCAAGGAGT TTGCCCATGA TTATCGTTAC TTCCCTGATC CTGATCTGGT GCCGGTGCTG GTTGATCAGG AGATGATTGA TCGGATCATG AGTGAGCTTC CCGAGTTTCC GGAAGAGAGG GCTGTCCGGT TTGTTGATGA GTATGCCATT CCGGCCTATG ATGCAGCCGT GCTGACTGTC GAGCGCGAGG TTGCGGACTA TTTCGAGGAG AGCGTCAGGG TTTCTGGCGA TGCCAAGGCT TCGTCCAACT GGGTGATGGG TGAGGTGATG CGCGTGCTGA AAGAGAGTTA TCTGGATATT GCGGAGTTCT CCATTCTTCC GGAACGGCTT GGAGGGTTGA TTGCGCTGAT TGGAAAGGGT GTGATCAGTA CTACCATCGC CAAGCAGGTT TTTGAGCTGA TGCTGAAGAG TGGCGATGCT CCAGCGGAAA TTGTTGAACG GGAGGGACTT GCACAGGTTT CTGACAGTGG CGCGATTGAG ACGGTTGTGC AGGCAATTCT TGATGCCAAC CCCGGTCAGT TGGCCGCCTA TCGCGGCGGA AAAACCAAGC TCCTTGGCTT TTTTGTTGGT CAGTGCATGA GCCAGATGAA GGGCAAGGCC AATCCCCAGA TGGTTAATGA GGTGCTGTTA AGGAAGCTCG AGGGGTGA
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Protein sequence | MKYELVVGLE VHCQLNTTSK AFCGCSAKFG KSANTNVCPV CLALPGALPV LNRRVVEDAV KLGLATGCSI APHSVLARKN YFYPDLPKGY QISQFEEPIC SEGMVHIDAG EGNREIRLIR IHIEEDAGKS IHDIGEETYI DLNRSGVPLL EIVSYPDLRT SKEASAYLQK VRQIVKYLGI SDGNMEEGSL RCDANVSLRP VGETEYGTRT EIKNMNSFKN VEKAIDYEVE RHREILEAGG VILQETRLWD ADKGETRSMR GKEFAHDYRY FPDPDLVPVL VDQEMIDRIM SELPEFPEER AVRFVDEYAI PAYDAAVLTV EREVADYFEE SVRVSGDAKA SSNWVMGEVM RVLKESYLDI AEFSILPERL GGLIALIGKG VISTTIAKQV FELMLKSGDA PAEIVEREGL AQVSDSGAIE TVVQAILDAN PGQLAAYRGG KTKLLGFFVG QCMSQMKGKA NPQMVNEVLL RKLEG
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