Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0230 |
Symbol | |
ID | 6461863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 223552 |
End bp | 224529 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726525 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002017184 |
Protein GI | 194335390 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGGA AACGAGCACC GTTGGTGGAT TTAAGCATAT TGCGGCGGCA GGCTGAAGCG CAACTCATTG CAGGCCGGAA AAAACATCTT GATGTTACCG CTTCCCCTGA TGAAATGCAG CGGATTATCC ATGAACTGGC AGTATACCAG ATAGAGCTTG AAATGCAGCA GGATGAACTG CTTCAGACGA GATTGGAGCT GGAGGAGAGC CTGGATTGTT ACACCGAACT GTATGACTTT GCTCCGCTTG GCTATCTGAC ACTCGACCGG GAGGGAGTGA TACGAAAGGT AAATCTGAGT GGTTCAAAGC TGATTGGCAT TGATCGATCC CACCTGATTG GTGATCGTCT GGGAGGATTT ATTCTGGCTG AAGATCTTCC GGGATATAAT GCTATGCTGG AGCGGGTATT CAGCTCCCGT GACCATGCTT CCTGTGAAGT CATACTTCAG CGTGATGGAA CCTCCTCTTC GTTTGATCCT TTCATATCTG GCACAACCGA TGTTCTCCAT AGCCGTACGG TTCGCATTGA TGCTGTTGTC AGTAATGATG GCCAAGAGTG CCGTGCAGTC ATTTCGGACA TCAGTATGCA AAAGCAGGTT GAACGAGAGA ATAAAGCGCT CATGGAGCGT TTGATTCAAG CCAGAAGGAC AAAGTCAATT GATCAGCCCG GCGGCGAATC CACAGGCAAC TTTAACCATC AGTTGCTTGA CAAAGTCATT CATTCAAGGA TACGGTTTGC AGCCCTTTCC TATTTGTATG TTGTTGAGCA GGCTTGCTTT GTGGAAATCA AGAAACAGGT CAGGACAACC GATGGTAATT TAAGCGTTCA TATGCGGATG CTTGAGTTGG CGGAGTATAT CAGTTGCGAT AAGGACGTTC AGTCACGCAA GCCGCAAACC ATCTACAGGA TAACGCCAAA GGGTCACGAC GCCTTTATGC AGTACAAGGA GTGTCTCATG GCGTTTCTTG GTACCTGA
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Protein sequence | MTRKRAPLVD LSILRRQAEA QLIAGRKKHL DVTASPDEMQ RIIHELAVYQ IELEMQQDEL LQTRLELEES LDCYTELYDF APLGYLTLDR EGVIRKVNLS GSKLIGIDRS HLIGDRLGGF ILAEDLPGYN AMLERVFSSR DHASCEVILQ RDGTSSSFDP FISGTTDVLH SRTVRIDAVV SNDGQECRAV ISDISMQKQV ERENKALMER LIQARRTKSI DQPGGESTGN FNHQLLDKVI HSRIRFAALS YLYVVEQACF VEIKKQVRTT DGNLSVHMRM LELAEYISCD KDVQSRKPQT IYRITPKGHD AFMQYKECLM AFLGT
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