Gene Ppha_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0230 
Symbol 
ID6461863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp223552 
End bp224529 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content48% 
IMG OID642726525 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002017184 
Protein GI194335390 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGGA AACGAGCACC GTTGGTGGAT TTAAGCATAT TGCGGCGGCA GGCTGAAGCG 
CAACTCATTG CAGGCCGGAA AAAACATCTT GATGTTACCG CTTCCCCTGA TGAAATGCAG
CGGATTATCC ATGAACTGGC AGTATACCAG ATAGAGCTTG AAATGCAGCA GGATGAACTG
CTTCAGACGA GATTGGAGCT GGAGGAGAGC CTGGATTGTT ACACCGAACT GTATGACTTT
GCTCCGCTTG GCTATCTGAC ACTCGACCGG GAGGGAGTGA TACGAAAGGT AAATCTGAGT
GGTTCAAAGC TGATTGGCAT TGATCGATCC CACCTGATTG GTGATCGTCT GGGAGGATTT
ATTCTGGCTG AAGATCTTCC GGGATATAAT GCTATGCTGG AGCGGGTATT CAGCTCCCGT
GACCATGCTT CCTGTGAAGT CATACTTCAG CGTGATGGAA CCTCCTCTTC GTTTGATCCT
TTCATATCTG GCACAACCGA TGTTCTCCAT AGCCGTACGG TTCGCATTGA TGCTGTTGTC
AGTAATGATG GCCAAGAGTG CCGTGCAGTC ATTTCGGACA TCAGTATGCA AAAGCAGGTT
GAACGAGAGA ATAAAGCGCT CATGGAGCGT TTGATTCAAG CCAGAAGGAC AAAGTCAATT
GATCAGCCCG GCGGCGAATC CACAGGCAAC TTTAACCATC AGTTGCTTGA CAAAGTCATT
CATTCAAGGA TACGGTTTGC AGCCCTTTCC TATTTGTATG TTGTTGAGCA GGCTTGCTTT
GTGGAAATCA AGAAACAGGT CAGGACAACC GATGGTAATT TAAGCGTTCA TATGCGGATG
CTTGAGTTGG CGGAGTATAT CAGTTGCGAT AAGGACGTTC AGTCACGCAA GCCGCAAACC
ATCTACAGGA TAACGCCAAA GGGTCACGAC GCCTTTATGC AGTACAAGGA GTGTCTCATG
GCGTTTCTTG GTACCTGA
 
Protein sequence
MTRKRAPLVD LSILRRQAEA QLIAGRKKHL DVTASPDEMQ RIIHELAVYQ IELEMQQDEL 
LQTRLELEES LDCYTELYDF APLGYLTLDR EGVIRKVNLS GSKLIGIDRS HLIGDRLGGF
ILAEDLPGYN AMLERVFSSR DHASCEVILQ RDGTSSSFDP FISGTTDVLH SRTVRIDAVV
SNDGQECRAV ISDISMQKQV ERENKALMER LIQARRTKSI DQPGGESTGN FNHQLLDKVI
HSRIRFAALS YLYVVEQACF VEIKKQVRTT DGNLSVHMRM LELAEYISCD KDVQSRKPQT
IYRITPKGHD AFMQYKECLM AFLGT