| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0220 |
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| Symbol | |
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| ID | 6462319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 213327 |
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| End bp | 214379 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642726515 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_002017174 |
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| Protein GI | 194335380 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT TAGGCATAGA AACCAGTTGT GACGAAACAT CGGGAGCCGT GCTTTGCAGC
GGACAGGTGC GCTCGAATGT TGTCAGTTCC CAGCGCTGTC ACGCACACTT TGGCGGTGTT
GTACCGGAAC TGGCTTCACG TGAACACGAA CGGCTTATTG TTTCAATTGT GGACGCTGCC
GTAACTGAGG CCAATATAAC AAAAAATGAT CTGGATGTCA TAGCCGCGAC CGCCGGTCCG
GGCTTAATCG GCGCCGTCAT GGTCGGACTC TGTTTTGCCC AGGGCATGGC GTATGCGCTC
CAAATCCCTT TTGTCCCGGT CAATCACATC GAAGCCCATA TCTTCTCTCC CTTTATTCAG
GAGGATCCTT TCCACTCCTC CCCTGAAGGC GCTTTTGTGT CGCTGACAGT TTCCGGCGGC
CATACCCTGC TCTCCGTTGT TGAGCCTGAT CTCTCCTACA GCGTGATCGG TCGAACGCTC
GACGATGCCG CTGGAGAGGC GTTCGACAAA ACCGGCAAGA TGCTCGGCCT CCCCTATCCG
GCAGGCCCGG TAATTGACAA ACTGGCAGAA AAGGGAGATC CCGCTTTCCA CCTCTTTCCA
CGAGCGCTCA CCTCAAAATC GCAGACCAGT AAAAACTACC TCGGAAATTT TGATTTCAGT
TTTTCCGGCC TGAAAACCTC CGTACTCACC TGGCTGCAAA AACAGAGCGC TGAATTCATC
GAACACCATA AAGCCGATAT TGCCGCATCC ATCCAGTATG CCATCGTCAG CGTACTGGTT
GAAAAAACCA TTGCAGCAGC GCGAAGCAGA GGTATCAAGA GTGTTTCAAT TGCCGGAGGA
GTCAGTGCAA ACTCAGCATT ACGAAGAGCC ATGAAAGAGG CTTGCAAGAG AGAGGGCATT
ACGCTCCATG TTCCGGGGAC TGTCTACTCA ACCGATAATG CCGCCATGAT CGCTACCCTT
GCCGCACTTA AACTCTCACG GGGCATGAAG GCTGAATGCT GCTACAATAT CGCGCCTTAC
GCAAGCTTTG CCGCTGGCTC AAGGATGGCA TGA
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| Protein sequence | MNILGIETSC DETSGAVLCS GQVRSNVVSS QRCHAHFGGV VPELASREHE RLIVSIVDAA
VTEANITKND LDVIAATAGP GLIGAVMVGL CFAQGMAYAL QIPFVPVNHI EAHIFSPFIQ
EDPFHSSPEG AFVSLTVSGG HTLLSVVEPD LSYSVIGRTL DDAAGEAFDK TGKMLGLPYP
AGPVIDKLAE KGDPAFHLFP RALTSKSQTS KNYLGNFDFS FSGLKTSVLT WLQKQSAEFI
EHHKADIAAS IQYAIVSVLV EKTIAAARSR GIKSVSIAGG VSANSALRRA MKEACKREGI
TLHVPGTVYS TDNAAMIATL AALKLSRGMK AECCYNIAPY ASFAAGSRMA
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