Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0218 |
Symbol | |
ID | 6462556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 211781 |
End bp | 212884 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726513 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_002017172 |
Protein GI | 194335378 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAA CAGCAGCAAA ATTGGTCCTG GAAAATGGTT CAGTCTATCA TGGAACCGCG TTTGGTCACA TCGGAGAAAC AACTGGCGAG GTGGTTTTCA ATACATCGCA TACCGGATAC CAGGAAATTC TCACCGACCC ATCCTATGCC GGCCAGATGG TGATGATGAC CTATCCGCTG ATAGGAAACT ACGGTATCAA CCCGACGGAT AATGAATCGG AAAAAATATG GGCTTCGGCT TTCATTGTCC ATGAAGTGTC GCGCGTTCAC AGTAACTTCG AAGCCACTGA AAGTCTTGAC TCCTGTCTCA AAAGAGCTGG TGTAATGGGT CTTGCCGGTA TTGATACCCG CAAGCTTGTA CGCGAAATCC GTGAAAAAGG GGCCATGAGA GGCGTTATTT CCGCCCTTGA AACAGACGAC GAAAAGCTGA GAGAGACAGC GCTTCAAAGC CCTGAAATGA GTGGCCGTGA TCTGGTCAAA ACTGTTACAG CCAAAGAAAA TTATACCCTT GAAAAGGAGA ACGCCCGCTA TCATGTAGCA GCACTTGATT ACGGCATCAA AACCAATATC CTGCGCATGC TGCAAGATGC AGGGTGCCGC ATAACAGTTC TTAAGGCCGG AACATCCGCT GATGAGATAA TCCAGCTTAA TCCGGACGGA GTTTTTCTCT CAAACGGACC TGGTGACCCT TCAGCCGTCG GTTATGCAAT CGAGACCATC AAACAGCTTG TCGATTATAA CCGCACGACA AAGCCATTAC CGATTTTCGG TATCTGCCTT GGTCACCAAC TGCTTTCGCT GGCGTTCGGC GCAGAAACCT ACAAGCTGAA ATTCGGCCAC CACGGCAGCA ATCACCCGGT TAAAAACCTC GCCAGCAACC AAATAGAGAT AACCTCACAA AATCATGGTT TTGCTGTAGA GATGGAGTCA CTGCCCGATG AGCTTGAAAT GACTCACCTC AACCTTTATG ATAATACCGT AGAGGGTGTA AAACACCGGC ATCTACCCTG CTTTTCGGTG CAGTACCATC CTGAAGCCGC TCCTGGACCA CACGACTCCC ATTACCTCTT TGCAGAGTTC ACCTCACTTA TGGATTTAAC GTAA
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Protein sequence | MQPTAAKLVL ENGSVYHGTA FGHIGETTGE VVFNTSHTGY QEILTDPSYA GQMVMMTYPL IGNYGINPTD NESEKIWASA FIVHEVSRVH SNFEATESLD SCLKRAGVMG LAGIDTRKLV REIREKGAMR GVISALETDD EKLRETALQS PEMSGRDLVK TVTAKENYTL EKENARYHVA ALDYGIKTNI LRMLQDAGCR ITVLKAGTSA DEIIQLNPDG VFLSNGPGDP SAVGYAIETI KQLVDYNRTT KPLPIFGICL GHQLLSLAFG AETYKLKFGH HGSNHPVKNL ASNQIEITSQ NHGFAVEMES LPDELEMTHL NLYDNTVEGV KHRHLPCFSV QYHPEAAPGP HDSHYLFAEF TSLMDLT
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