Gene Ppha_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0218 
Symbol 
ID6462556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp211781 
End bp212884 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content48% 
IMG OID642726513 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_002017172 
Protein GI194335378 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCAA CAGCAGCAAA ATTGGTCCTG GAAAATGGTT CAGTCTATCA TGGAACCGCG 
TTTGGTCACA TCGGAGAAAC AACTGGCGAG GTGGTTTTCA ATACATCGCA TACCGGATAC
CAGGAAATTC TCACCGACCC ATCCTATGCC GGCCAGATGG TGATGATGAC CTATCCGCTG
ATAGGAAACT ACGGTATCAA CCCGACGGAT AATGAATCGG AAAAAATATG GGCTTCGGCT
TTCATTGTCC ATGAAGTGTC GCGCGTTCAC AGTAACTTCG AAGCCACTGA AAGTCTTGAC
TCCTGTCTCA AAAGAGCTGG TGTAATGGGT CTTGCCGGTA TTGATACCCG CAAGCTTGTA
CGCGAAATCC GTGAAAAAGG GGCCATGAGA GGCGTTATTT CCGCCCTTGA AACAGACGAC
GAAAAGCTGA GAGAGACAGC GCTTCAAAGC CCTGAAATGA GTGGCCGTGA TCTGGTCAAA
ACTGTTACAG CCAAAGAAAA TTATACCCTT GAAAAGGAGA ACGCCCGCTA TCATGTAGCA
GCACTTGATT ACGGCATCAA AACCAATATC CTGCGCATGC TGCAAGATGC AGGGTGCCGC
ATAACAGTTC TTAAGGCCGG AACATCCGCT GATGAGATAA TCCAGCTTAA TCCGGACGGA
GTTTTTCTCT CAAACGGACC TGGTGACCCT TCAGCCGTCG GTTATGCAAT CGAGACCATC
AAACAGCTTG TCGATTATAA CCGCACGACA AAGCCATTAC CGATTTTCGG TATCTGCCTT
GGTCACCAAC TGCTTTCGCT GGCGTTCGGC GCAGAAACCT ACAAGCTGAA ATTCGGCCAC
CACGGCAGCA ATCACCCGGT TAAAAACCTC GCCAGCAACC AAATAGAGAT AACCTCACAA
AATCATGGTT TTGCTGTAGA GATGGAGTCA CTGCCCGATG AGCTTGAAAT GACTCACCTC
AACCTTTATG ATAATACCGT AGAGGGTGTA AAACACCGGC ATCTACCCTG CTTTTCGGTG
CAGTACCATC CTGAAGCCGC TCCTGGACCA CACGACTCCC ATTACCTCTT TGCAGAGTTC
ACCTCACTTA TGGATTTAAC GTAA
 
Protein sequence
MQPTAAKLVL ENGSVYHGTA FGHIGETTGE VVFNTSHTGY QEILTDPSYA GQMVMMTYPL 
IGNYGINPTD NESEKIWASA FIVHEVSRVH SNFEATESLD SCLKRAGVMG LAGIDTRKLV
REIREKGAMR GVISALETDD EKLRETALQS PEMSGRDLVK TVTAKENYTL EKENARYHVA
ALDYGIKTNI LRMLQDAGCR ITVLKAGTSA DEIIQLNPDG VFLSNGPGDP SAVGYAIETI
KQLVDYNRTT KPLPIFGICL GHQLLSLAFG AETYKLKFGH HGSNHPVKNL ASNQIEITSQ
NHGFAVEMES LPDELEMTHL NLYDNTVEGV KHRHLPCFSV QYHPEAAPGP HDSHYLFAEF
TSLMDLT