Gene Ppha_0110 details

Gene Information

• Locus tag: Ppha_0110
• Symbol: rplI
• ID: 6461123
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: +
• Start bp: 123840
• End bp: 124295
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642726423
• Product: 50S ribosomal protein L9
• Protein accession: YP_002017083
• Protein GI: 194335289
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000508651
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGTCA TTTTAAGAAA CAATGTGGCT ACCCTTGGCG ATGCAGGTGA AGTTGTTGCC 
GTCAAGAACG GTTATGCAAA CAATTTCCTG ATTCCGCAGG GTATGGCTAT AAGAGCTACC 
GAGGGAACGC TCAAAGCTCT TGAAACAGAG AAAAAGCAGC AGACCAAAAA AATCGAGTTG 
CAGCGCAAAC ACGCCCGTGA GCATGCTCAG ACAATCGAGC AGATGTCACT GAAGGTTTAT 
GCAAAAGCTG GTGATTCGGG CAAACTCTTC GGGACCGTGA CTTCGGCTGA TATTGCCGAT 
GCCCTCAAAG CTCAGGGGAT CGACATCGAC CGCCGGAAGA TCACCATTGA AGCTCCGATC 
AAGTCGCTCG GTAAATATGA AGCAGACGCA AAAATCTTTC AGGATATCAC GGTCAAAGTT 
CATTTCGAAG TCGAAGCTGA AGGCTCAGAA GCCTGA 

 

Protein sequence

MKVILRNNVA TLGDAGEVVA VKNGYANNFL IPQGMAIRAT EGTLKALETE KKQQTKKIEL 
QRKHAREHAQ TIEQMSLKVY AKAGDSGKLF GTVTSADIAD ALKAQGIDID RRKITIEAPI 
KSLGKYEADA KIFQDITVKV HFEVEAEGSE A