| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0109 |
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| Symbol | rpsR |
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| ID | 6461684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 123525 |
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| End bp | 123803 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726422 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_002017082 |
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| Protein GI | 194335288 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000199865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACAAA AATTTACACA CGCACAGGGC CACAAATCAC AGGGCAACAA ATCACTGAGC
AACGCGTTGG CGTCGAAGAA AAAAGTGTCG AAAAATCAGG TTGTCTTTTT CGATTATCGC
GACGAACGCA AGCTGAAGAG ATTTATTAAC GATCAAGGAA AAATTATTCC TCGTCGCATC
ACCGGACTCT CTGCCAAAGA GCAGAACCTC CTTACCCATT CAGTAAAATG GGCACGGTTC
CTGGCAGTAA TCCCTTATGT TGTCGACGAA TACAAATAA
|
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| Protein sequence | MRQKFTHAQG HKSQGNKSLS NALASKKKVS KNQVVFFDYR DERKLKRFIN DQGKIIPRRI
TGLSAKEQNL LTHSVKWARF LAVIPYVVDE YK
|
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