Gene Ppha_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0101 
Symbol 
ID6461957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp112903 
End bp113322 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content52% 
IMG OID642726409 
Productferric uptake regulator, Fur family 
Protein accessionYP_002017074 
Protein GI194335280 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.133113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAAC AATCTGGAGA AAAAACATTA CGCTACAGCC GGCAACGGCA ACGGCTGCTT 
GAACTCCTGC AATCGACCGA CACCCACCCC ACCGCCGGAT GGCTCTATGA CATGATGAAG
CCGGATTTTC CGAATCTCAG CCTTGGCACC GTCTACCGGA ACCTTGCCGT ACTGATCGAG
CAGGGAATGG TAAAAAAAAT TGATGCCGGC AGTACCTTCG ATCGGTTCGA AGCAAAAACT
ACGCCCCACT ATCATCTCAT CTGCCGCAAG TGCGGTACCA TCATTGATTT CGAGAATCGG
CTTTTTCCGG AAATCGAAAC CGTCATCAGC AAAGCGGCTG ACTTTACCGT CGAAGGGCAC
CGCATCGATT TTTTCGGCAC CTGCGGCGCA TGCAGAGCCC GAAACAGGAA TAACTCTTGA
 
Protein sequence
MQQQSGEKTL RYSRQRQRLL ELLQSTDTHP TAGWLYDMMK PDFPNLSLGT VYRNLAVLIE 
QGMVKKIDAG STFDRFEAKT TPHYHLICRK CGTIIDFENR LFPEIETVIS KAADFTVEGH
RIDFFGTCGA CRARNRNNS