| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0096 |
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| Symbol | |
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| ID | 6462121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 99376 |
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| End bp | 101859 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726399 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_002017069 |
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| Protein GI | 194335275 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00180112 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCG AAAGAATAGT CCCGATCAGT ATTGAAGAAG AAATGCGGGG TTCTTATCTC
GATTATTCGA TGTCGGTCAT TGTCAGTCGT GCGCTGCCCG ATGTGCGGGA TGGACTGAAG
CCGGTTCACC GAAGGGTTCT TTTCGGTATG CACGAACTTG GTCTGCAGGC AGGTAAACCG
CATAAAAAGT CTGCCCGTGT TGTTGGTGAA GTGCTTGGCA AGTTCCATCC CCATGGCGAT
ACCGCTGTCT ACGACAGTCT TGTGCGTCTG GTGCAGGAGT TTTCCATGCG TTATCCCCTG
ATTGACGGTC AGGGAAACTT TGGTTCGGTT GATGGTGACT CTCCTGCTGC CATGCGATAC
ACGGAGGTGC GCATGAAGAG CATTGCCGGG GAAATGCTGA AGGATCTCGA CAAGGCTACC
GTTGACTTTT CCCTTAATTT TGATGACTCG CTTGAGGAGC CTACGGTTCT TCCGTCGGCG
ATACCCAACC TCCTTGCGAA TGGTTCGTCA GGTATTGCGG TCGGTATGGC AACCAATATT
CCACCCCAGA ATCTCCGGGA GGTTGTTGAT GGCATGATCG CCCTGATTGC AAATCCGGAA
CTGGAAGTGG CTGATCTCAT GAAATATGTG ATCGCACCTG ATTTTCCAAC TGGCGGAATT
ATTTATGGTT ATGAGGGTGT TCGTTCGGCT TATATGACCG GCAGGGGTAA GGTTGTGATC
CGGGCGCGGG CCATTGTTGA GATTACTCCG AAAAACAGTC GGGAATCGAT TGTTGTTACA
GAGCTTCCTT ATCAGGTGAA CAAGGTGCGG CTGATCGAGA AAATCGTTGA GCTGGTGCAC
GATAAAAAAA TTGAAGGTAT TGCCGATATC CGCGATGAGT CTGACCGTGA CGGCATGAGG
CTGGTGATTG AGCTGAAGCG GGATGCTGTG GCTATGGTTG TTCTGAATAA CCTGTACAAG
CATACCCCGA TGCAGGATAC GTTCGGGGTG ATCATGCTTG CGCTGGTTGA TGGGGTGCCG
AGGATCCTCA ATCTCAAGGA GATGATGGTC TATTATATCA AGCATCGCAA TGAGATTGTT
CTGCGCCGTA CACAATTTGA CCTTGCGACA GCCGAAAAGC GGGCCCATAT TCTTGAAGGA
CTGAAGATCT GTCTTGATAA CCTTGACGAG GTGATTTCAA CGATTCGTGA ATCACCGGAT
GCCTCAACGG CTCAGGAGAG GCTCATTGAG CGTTTCGGAC TGTCGGAGTT GCAGTCGAAG
GCTATTCTTG AGATGCGTCT GCAGCGTCTG ACCGGGATGG AGCGCAAGAA GATCGATCTG
GAGTACACGG AGGTACTTGC CTTTATTGAG GAGCTGCGCT TTATTCTCGG CAGTCCTGAG
AAACAGATGC AGATTATCCG CGAAGAGTTG CTGAAGGTCA GGGAGGTCTA TGGTGATGAA
CGCCGGACTG AAATTGTGCC GCAGGAGGGT GATTTCTCCA TCGAAGATAT GATTGCCCAG
GAAGATGTGG TGATCACCAT TACCCATGAG GGCTTTATCA AGCGTTTCCC GGTTTCGGGT
TATCGCCGCC AGGCACGGGG TGGCAAAGGG GTCACAGGGG CTCAGGCCAA GCATGACGAT
TTTGTCGAGC ATATGTTTAT TGCCTCGACC CATAATTATA TACTCTTCTT CACCAACAGG
GGCCGTTGTC ACTGGCTGAA AGTGTACGAA ATTCCTGAAG CTGGACGTGC TGCGAGGGGT
CGTGCGCTGG CCAATATCAT GGAGTTGCAG CAGGGCGAGA AAATCAGAGC CTACATCAAT
ATCCGCAATT TTGATGAGCC GGGGTTCATT GTCATGGCGA CGACCAATGG TATCGTGAAA
AAAACACCGC TTGAAGATTT TTCTCATCCA AGAAAGAATG GTATTGCTGC CATTACTATT
GATGAGCATG ATGAGCTGCT TGATGCCCGT CTGACTGATG GTGATCATCA GATTATTCTG
GCCAAGAATT CCGGTTTTGT CGTACGCTTT CCCGAGGCTG AGATCCGCTC GATGGGACGT
ACTGCCATGG GCGTCAAGGG TATCACGCTT GACGAGGGTG AGAAGTGTAT TTCAATGGTG
ACCACCAAGC GCTTCGATAC GGCGCTGCTT GCTGTTACCG ATAACGGTTT TGGCAAGAGA
AGTCGTGTGG AGGATTATCG ACTGACGCGG CGCGGTGCTC GCGGGGTTAT TACCCTTAAG
GCTCATGAAA AGGTTGGTGC ACTGATTGGT CTGTTGGATG TCAATGATGA CGACGATCTG
ATCATCATTA CAGCTCAGGG TATCGTGAAT CGCCAGCATG TCTCCGATAT ACGGTTGACT
GGCAGGAACA CTTCCGGAGT CAGGCTTGTC AGGCTGATGG CCGGGGATAT CATTTCTGCT
CTGGCGCGAG TGCCGAAGAG CGATGAAGAG GTTGATTCTG ATGTGCTTCT GGAAGATCCT
GATGGTCAGA TTGACCTGTT TTAA
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| Protein sequence | MQRERIVPIS IEEEMRGSYL DYSMSVIVSR ALPDVRDGLK PVHRRVLFGM HELGLQAGKP
HKKSARVVGE VLGKFHPHGD TAVYDSLVRL VQEFSMRYPL IDGQGNFGSV DGDSPAAMRY
TEVRMKSIAG EMLKDLDKAT VDFSLNFDDS LEEPTVLPSA IPNLLANGSS GIAVGMATNI
PPQNLREVVD GMIALIANPE LEVADLMKYV IAPDFPTGGI IYGYEGVRSA YMTGRGKVVI
RARAIVEITP KNSRESIVVT ELPYQVNKVR LIEKIVELVH DKKIEGIADI RDESDRDGMR
LVIELKRDAV AMVVLNNLYK HTPMQDTFGV IMLALVDGVP RILNLKEMMV YYIKHRNEIV
LRRTQFDLAT AEKRAHILEG LKICLDNLDE VISTIRESPD ASTAQERLIE RFGLSELQSK
AILEMRLQRL TGMERKKIDL EYTEVLAFIE ELRFILGSPE KQMQIIREEL LKVREVYGDE
RRTEIVPQEG DFSIEDMIAQ EDVVITITHE GFIKRFPVSG YRRQARGGKG VTGAQAKHDD
FVEHMFIAST HNYILFFTNR GRCHWLKVYE IPEAGRAARG RALANIMELQ QGEKIRAYIN
IRNFDEPGFI VMATTNGIVK KTPLEDFSHP RKNGIAAITI DEHDELLDAR LTDGDHQIIL
AKNSGFVVRF PEAEIRSMGR TAMGVKGITL DEGEKCISMV TTKRFDTALL AVTDNGFGKR
SRVEDYRLTR RGARGVITLK AHEKVGALIG LLDVNDDDDL IIITAQGIVN RQHVSDIRLT
GRNTSGVRLV RLMAGDIISA LARVPKSDEE VDSDVLLEDP DGQIDLF
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