Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0092 |
Symbol | |
ID | 6462658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 96522 |
End bp | 97412 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642726395 |
Product | hypothetical protein |
Protein accession | YP_002017065 |
Protein GI | 194335271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00283679 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGAAA TTATCTATTT TTCCAGAAGT AAACCATCAG ATTTACTTCA CATAAATTCC TTCACGACTA TGCAAGATAA ATGGAGTATT GCGTCTACCC TTTTCTCGGC AATAGGGTCT GTTGCAACTA CAGTCTACAG CTACGTTGCT GTTTTAGATA TTTTGAACAA ATCAAAAAAG AGCGCGGGCC TTGACAGGAA AGGGCCTGCA ATAAGTGGTG TAAAAAGCTT TTATAAACCC ATATTCAAGT GGCTTACCTA CCTCTTTGCA GCAATTGGAG CTATCACTGT AGCTATTAGT GCTTTCGTGA GTCTAGCTGT TATGGTTGTT CAAACCATAG CACCTGACTG GAATCCTGTC ATGAAACTTC AAAAGGGGAT GGCTTCCGGT GTCATGGCTG TGGTTGCACC ACAGTTAACT GTTTCAGGTC CAGAAACACA ACGGGTAGCC ATACCGGAAC CTACCTTGAT TAAGCCATCT TATCGACCGG CAAAAATTGA GCCATTCACG GTTTCGCTCT CTCCGGCAAC TATTGATAAC GAAATCCATG TCAAGGCCAC TATCAGGAAC ACCACCTCTC AGCCTGTTTA TATTTCTCTA AACAACGCAC AACGTCCGGT TTTAATCGAT GATAGTTCTG GTCATACGTC TGAAATGTTA TATCAAGAAG GGATCAGCAT GAGTTCGTAC GAAATGTCTG GGAAAGAACG GGAAGAGGGT ACGTACACAA AAATCCCGCC CGGTGAAGCT TTGGCGATAG GCCTACACTT CAGTGTTTAT CATCCAGCTC CTCAAAATGG AGGAACGGCT AATATAACAT TCGGTTTTAT ATACTTATAC GACGGCAAAG CAGAAAAAGT ATCGAAAACA CCGACCACTT CGTTCAGATA G
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Protein sequence | MREIIYFSRS KPSDLLHINS FTTMQDKWSI ASTLFSAIGS VATTVYSYVA VLDILNKSKK SAGLDRKGPA ISGVKSFYKP IFKWLTYLFA AIGAITVAIS AFVSLAVMVV QTIAPDWNPV MKLQKGMASG VMAVVAPQLT VSGPETQRVA IPEPTLIKPS YRPAKIEPFT VSLSPATIDN EIHVKATIRN TTSQPVYISL NNAQRPVLID DSSGHTSEML YQEGISMSSY EMSGKEREEG TYTKIPPGEA LAIGLHFSVY HPAPQNGGTA NITFGFIYLY DGKAEKVSKT PTTSFR
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