Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0071 |
Symbol | |
ID | 6462680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 72179 |
End bp | 73465 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726373 |
Product | Radical SAM domain protein |
Protein accession | YP_002017044 |
Protein GI | 194335250 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTATC CCTATTTCCC GTTTTCTCTC TGCCAGCAGG AAGATGGTCA GTTCATGCTC TCTTCGCCAT ACGGGGAATG CAAGGTCAAT CGCGATGCAG CAGCAATCCT CAGGTTGTGT AACGGCAGTC GCTCTCTCCA GGATATTGTT GGAAAACTGC AGGCTCGTTA TGATCTGGAT CATGCCCTGA TGCATGTAAA ATCTGAAAAA CTTATCAATA ATCTCGCAGC CAAAGGGCTG GTATGGATCA AAGAAAAACC CATGCGCTGG TTCAACGCAC CTCCGCCCCA AACGATATTC TGGGAGGTTA CCTCTCGCTG TAATCTTCAG TGCCTGCACT GTGTTGTTTC CGCAGGAGAG AGTGTGACTC ATGATCTTTC AACTCGGCGC TGTCTGGAGT TGATTGATGA ATGGGCGGCC ATCGGAGTAC AGGAGATCAC TTTCAGTGGG GGAGAGCCAC TGCTCAGAGA AGATTTATTC GAACTGGCCG CAGCCGCAAA ACAGAGAAAT CTCACGATCA GTATGGCAAC AAACGGTACC TTGATGACGA GGGATGTGGC TCGAAGATGC AAAGCTCTCG GTTTTGATGT GCAGATCAGT CTGGACGGAT CGACTGCGGA GATTTACGGA GCGGTTCGCG GGCGTAAAGA GGCGTTTGCT GATGTCATGG AAGGAATTCG CAATACGCTT TCCGAGGGTG TTAACCTTAC CGTCGGAACC GTTTTGACAA AAAATAATGT CGATGATATA CCGGAGTTGC TGAAATTGGT GGAACGTTCC GGAATTCCTT ATTTCCGCCT GATTCCCTTT ATCCCTTCCG GTCGGGGACA ACAGAACCGT GATCTTGAGC TTGATCCGCT GCAGGTAAAA AAAGTATCGG AAGAGCTTGT CGCACAACGG GATCTCTGGT CGTTTACCAT TCTTCCGGTT GAATTTGAGC TCACTTTTTC AGCTCCTTCA GGCGCATCAC TTGATCGGTC AAGAGCAAGT GAATGTGGTG GAGCTACTCA CTATTGTACC GTTACTCCGT CAGGTGCTGT TCTTCCGTGC CATTATTTTG AAGGAGTGGT CACTCACTCA GTGAGAAACC GTTCATTCAT GGAGGTCTGG AGAAATTCCC GCTTTCTTAA CTATTTTCGC AGTATTGAGA TTGGTGATAT CAAGGGATAC TGTCATGATT GCCGTTGGCT CGCTGATTGC CGGGGTGGTT GCAAGGCTGC AAATTTCAGT TATAAGGATC CTTTCCAGTC AAACAGGCAC TGTTGGGTTG TCAGGGAGAA CCAATAA
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Protein sequence | MSYPYFPFSL CQQEDGQFML SSPYGECKVN RDAAAILRLC NGSRSLQDIV GKLQARYDLD HALMHVKSEK LINNLAAKGL VWIKEKPMRW FNAPPPQTIF WEVTSRCNLQ CLHCVVSAGE SVTHDLSTRR CLELIDEWAA IGVQEITFSG GEPLLREDLF ELAAAAKQRN LTISMATNGT LMTRDVARRC KALGFDVQIS LDGSTAEIYG AVRGRKEAFA DVMEGIRNTL SEGVNLTVGT VLTKNNVDDI PELLKLVERS GIPYFRLIPF IPSGRGQQNR DLELDPLQVK KVSEELVAQR DLWSFTILPV EFELTFSAPS GASLDRSRAS ECGGATHYCT VTPSGAVLPC HYFEGVVTHS VRNRSFMEVW RNSRFLNYFR SIEIGDIKGY CHDCRWLADC RGGCKAANFS YKDPFQSNRH CWVVRENQ
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