Gene Ppha_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0071 
Symbol 
ID6462680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp72179 
End bp73465 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content48% 
IMG OID642726373 
ProductRadical SAM domain protein 
Protein accessionYP_002017044 
Protein GI194335250 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC CCTATTTCCC GTTTTCTCTC TGCCAGCAGG AAGATGGTCA GTTCATGCTC 
TCTTCGCCAT ACGGGGAATG CAAGGTCAAT CGCGATGCAG CAGCAATCCT CAGGTTGTGT
AACGGCAGTC GCTCTCTCCA GGATATTGTT GGAAAACTGC AGGCTCGTTA TGATCTGGAT
CATGCCCTGA TGCATGTAAA ATCTGAAAAA CTTATCAATA ATCTCGCAGC CAAAGGGCTG
GTATGGATCA AAGAAAAACC CATGCGCTGG TTCAACGCAC CTCCGCCCCA AACGATATTC
TGGGAGGTTA CCTCTCGCTG TAATCTTCAG TGCCTGCACT GTGTTGTTTC CGCAGGAGAG
AGTGTGACTC ATGATCTTTC AACTCGGCGC TGTCTGGAGT TGATTGATGA ATGGGCGGCC
ATCGGAGTAC AGGAGATCAC TTTCAGTGGG GGAGAGCCAC TGCTCAGAGA AGATTTATTC
GAACTGGCCG CAGCCGCAAA ACAGAGAAAT CTCACGATCA GTATGGCAAC AAACGGTACC
TTGATGACGA GGGATGTGGC TCGAAGATGC AAAGCTCTCG GTTTTGATGT GCAGATCAGT
CTGGACGGAT CGACTGCGGA GATTTACGGA GCGGTTCGCG GGCGTAAAGA GGCGTTTGCT
GATGTCATGG AAGGAATTCG CAATACGCTT TCCGAGGGTG TTAACCTTAC CGTCGGAACC
GTTTTGACAA AAAATAATGT CGATGATATA CCGGAGTTGC TGAAATTGGT GGAACGTTCC
GGAATTCCTT ATTTCCGCCT GATTCCCTTT ATCCCTTCCG GTCGGGGACA ACAGAACCGT
GATCTTGAGC TTGATCCGCT GCAGGTAAAA AAAGTATCGG AAGAGCTTGT CGCACAACGG
GATCTCTGGT CGTTTACCAT TCTTCCGGTT GAATTTGAGC TCACTTTTTC AGCTCCTTCA
GGCGCATCAC TTGATCGGTC AAGAGCAAGT GAATGTGGTG GAGCTACTCA CTATTGTACC
GTTACTCCGT CAGGTGCTGT TCTTCCGTGC CATTATTTTG AAGGAGTGGT CACTCACTCA
GTGAGAAACC GTTCATTCAT GGAGGTCTGG AGAAATTCCC GCTTTCTTAA CTATTTTCGC
AGTATTGAGA TTGGTGATAT CAAGGGATAC TGTCATGATT GCCGTTGGCT CGCTGATTGC
CGGGGTGGTT GCAAGGCTGC AAATTTCAGT TATAAGGATC CTTTCCAGTC AAACAGGCAC
TGTTGGGTTG TCAGGGAGAA CCAATAA
 
Protein sequence
MSYPYFPFSL CQQEDGQFML SSPYGECKVN RDAAAILRLC NGSRSLQDIV GKLQARYDLD 
HALMHVKSEK LINNLAAKGL VWIKEKPMRW FNAPPPQTIF WEVTSRCNLQ CLHCVVSAGE
SVTHDLSTRR CLELIDEWAA IGVQEITFSG GEPLLREDLF ELAAAAKQRN LTISMATNGT
LMTRDVARRC KALGFDVQIS LDGSTAEIYG AVRGRKEAFA DVMEGIRNTL SEGVNLTVGT
VLTKNNVDDI PELLKLVERS GIPYFRLIPF IPSGRGQQNR DLELDPLQVK KVSEELVAQR
DLWSFTILPV EFELTFSAPS GASLDRSRAS ECGGATHYCT VTPSGAVLPC HYFEGVVTHS
VRNRSFMEVW RNSRFLNYFR SIEIGDIKGY CHDCRWLADC RGGCKAANFS YKDPFQSNRH
CWVVRENQ