| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0068 |
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| Symbol | |
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| ID | 6462864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 68635 |
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| End bp | 69828 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642726370 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_002017041 |
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| Protein GI | 194335247 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGGT TTTCAAAAGC TGTATCATCG CTTCGTTCTT CGGAAATCAG GGATCTCATG
ACCCTTGCGT CGAGGCCCGA CATCATCTCT TTTGCGGGGG GAATGCCCGG CAATGAGCTT
TTTCCCGTGG AAGCAGTTGA AGAGCTTTTC CGTGGGCTCG ACCTGAAAAA GAAGCAGGCG
GCATTTCAGT ATGGCCCGAC ACCCGGTCTT CCCTCACTTC TTGAGTCACT CGGCGGCTTC
CTTGAAAAAA AGGGGTTACC GGTTAAAGAG AACCGGCTGC TTATCACCAC CGGCTCCCAG
CAGGGGCTCA ACCTGCTGGC CAAAGCCTTT ATTGATCCGG GGGAGCCTGT GCTTGTCGAA
AATCCCTGCT TTATCGGGGC GCTTTCGGCA TTCCGAGCCA GTGAGGCGGA GCTGAGAGGG
GTCGCGGTTG ATCGCGACGG TATTTCAATG GAGGCGCTGC AGCAGGAACT CGACCGGAAA
GAGAGGGCAA AATTTCTCTA TATCACCCCC TATTTCCATA ATCCGGCAGG GCTGCTCTAC
ACTGCTGAAC GCAAGGCGCA GCTCATCAAT GCGCTTCAAG GCCAGCATAT TCCGCTCATT
GAAGATGATG CATACGGTGA CCTCTATTTT TATGAAGAGG ATCGCCCGCG CCTAAAGCCG
ATCAAGGCAA TCAATCCGGC AGGGATCAAC GTCTGCTATA CCGGCTCTTT CTCGAAAATT
CTCGGCCCCG GTTTACGGCT TGGCTGGATG CTCGCGCCCG ATGAAATTTA TCAGAAATGC
GAGCTTATCA AGCAGTCTGC CGATGCCTGC TCACCAAGCT TCACCCAGGT TCTGGCCGAT
GCTTTCATAC GTTCAGGTCA AATCTACACC TATATTGCGG GAGTACGGCA GGAGTACAAG
AGAAGGGCGG AGGCCATGGT GGCCGCTCTC AGGGAGCATA TGCCTGATTA TGTGCAGTGG
AACGAACCTC GTGGAGGCTT CTACATCTGG CTCACGCTGC CGGATGAGGC TGATGCAACC
CGAATCATGA TGGAAGCCGT CGAAGGTGGC GCGGTCTTTG TGGCCGGAAA AACATTTGAT
CCTGAAGGGA AGCGCAACAA CTCCCTGCGC CTCTCCTACT GCAACAACAG CCCGGAGCAG
ATCGCCGAGG GCATTCCGAT TGTGGCGGCA GCCATCCGGA AGTTCTGTGG ATAA
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| Protein sequence | MPRFSKAVSS LRSSEIRDLM TLASRPDIIS FAGGMPGNEL FPVEAVEELF RGLDLKKKQA
AFQYGPTPGL PSLLESLGGF LEKKGLPVKE NRLLITTGSQ QGLNLLAKAF IDPGEPVLVE
NPCFIGALSA FRASEAELRG VAVDRDGISM EALQQELDRK ERAKFLYITP YFHNPAGLLY
TAERKAQLIN ALQGQHIPLI EDDAYGDLYF YEEDRPRLKP IKAINPAGIN VCYTGSFSKI
LGPGLRLGWM LAPDEIYQKC ELIKQSADAC SPSFTQVLAD AFIRSGQIYT YIAGVRQEYK
RRAEAMVAAL REHMPDYVQW NEPRGGFYIW LTLPDEADAT RIMMEAVEGG AVFVAGKTFD
PEGKRNNSLR LSYCNNSPEQ IAEGIPIVAA AIRKFCG
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