| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0056 |
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| Symbol | |
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| ID | 6462907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 55025 |
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| End bp | 56326 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642726359 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002017030 |
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| Protein GI | 194335236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTGC CTGCTGAAAC TGTTCTCCCA ACCAATCCGA AGCCTCAAAA GCGAAACGGA
CTTTCCGGCC AATTGCTCAC GGCTTTTCCT GCTTTTGAGA GCCCTAATTT CCGGCGCTAT
TTTCCCGGGC AGGTGATCTC CATGATTGGC ACATGGATAC AGATGGTAGC GCAAGGGTGG
CTGGTGCTTG AAATAACCGG TTCCGCTTTC GACGTGGGGC TTGCGGCGGC GGCCTCCACA
CTCCCAACCC TTTTTCTCTC CCTCCTCGGT GGCGTGGTTG TTGACCGTTA CCCAAGGCGC
ACCATCCTGC TCTGGACGCA GTCTGCGGCC ATGCTGCTCG CCTTTGTGCT TGGGCTCTTT
GCCGTGACCG GCACGGTGAC CATCTGGATT ATCCTTGTAC TCTCCTTTCT TCTTGGCTGT
GTGAACGCCC TCAATGTGCC TGCACTTCAG GCATTTCTCA GCGAAATCGT GGAGCGGGAG
CATCTTGCTT CGGCCATTGC CATGAACTCA GCGATCTATA ACGGTTCACG GGTTATCGGC
CCCGCTATTG CAGGGTTTCT TATATCGGCC ACCGGAACAG GCACCGCCTT TCTGCTCAAC
GGAGTCAGTT TTTTCGCAGT CATCCTCTCC CTGCTCTCCA TGAAGAACAC CCTAATAGAG
CCTGCTGCAA AAACAAGCCA GAATCCCCTG CAGTCGATCA GGGAGGGGCT GAGCTATGCA
TGGGGGCATC CGGTGATCAG GACAAGTATC TTTTTTATAG CGGTCATCTC CATTTTTGCA
TGGTCTTATG TCACCATGCT GCCCGTGATT GCCAAGCGTA CCTTCGGCAT GGATGCGTCG
GGCATGGGAT ACCTCTATGG CGTGTCGGGT CTCGGCTCGG TCGTCGGCAC CGTGCTGGTC
TCCATCTATT CCAGGAAAAT TGACCGCCTT GTCTTCATTG CCGGAGGAAC AATTCTCTTC
GCTCTCGCCC TTATCGGCTT TACCTATACC ACGCACCTTC CGGCAGCCCT CTTCTTTCTC
TTTGTCAGCG GCTTCGGGCT TGTCTCGGCA GTCTCAACCC TCAGCGCCAC CATCCAGGGC
ACGGTTGACG ACCGTTTCCG CGGAAGGGTG ATGAGCCTCT ACATGATGAT TTTTATGGGC
TTCATGCCGA TCGGCAACCT TGAAATCGGC TATCTTTCAG AACACTTCGG TACCGGTATT
GCCATCCGTA TTGGCTGTGT CGTGACCATT CTGGCGGCAG TGACTCTCAT CTTCACCAGC
CGAGGGGTGC GCAAGGCCTA CAGCAGTTAC AAGGCATCGT AA
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| Protein sequence | MTLPAETVLP TNPKPQKRNG LSGQLLTAFP AFESPNFRRY FPGQVISMIG TWIQMVAQGW
LVLEITGSAF DVGLAAAAST LPTLFLSLLG GVVVDRYPRR TILLWTQSAA MLLAFVLGLF
AVTGTVTIWI ILVLSFLLGC VNALNVPALQ AFLSEIVERE HLASAIAMNS AIYNGSRVIG
PAIAGFLISA TGTGTAFLLN GVSFFAVILS LLSMKNTLIE PAAKTSQNPL QSIREGLSYA
WGHPVIRTSI FFIAVISIFA WSYVTMLPVI AKRTFGMDAS GMGYLYGVSG LGSVVGTVLV
SIYSRKIDRL VFIAGGTILF ALALIGFTYT THLPAALFFL FVSGFGLVSA VSTLSATIQG
TVDDRFRGRV MSLYMMIFMG FMPIGNLEIG YLSEHFGTGI AIRIGCVVTI LAAVTLIFTS
RGVRKAYSSY KAS
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