Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0050 |
Symbol | |
ID | 6462941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 47709 |
End bp | 49562 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642726353 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_002017024 |
Protein GI | 194335230 |
COG category | [C] Energy production and conversion |
COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.465134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATGA ATCCGCCGGA CTATGTGAAA AACAAAAAGC TGATCCAATG GGTGCAGGAG ATGGCTGAGC AATGTTGTCC GAGTACCATA CACTGGTGTG ACGGTTCAGA GGAAGAGTAC GACATCCTTG CCCGCCAGAT GGTAGAGAGT GGTACGTTTA TCAAATTGTC GGAAGAGAAG CGCCCGAACA GCTATCTCTG CCGTTCGGAC CCGAGTGATG TTGCAAGGGT TGAAGACAGA ACCTACATCT GCAGTATTCG CCGCCAGGAT GCAGGTCCAA CCAACAATTG GGTCGCTCCG AGGGAGATGA AAGAGACCCT GAAAGGGCTT TTCAAGGGCT GTATGACTGG CCGAACCATG TATGTTATTC CTTTCAGCAT GGGGCCTCTT GGGTCTCCCA TTGCCCATAT CGGTGTCGAA ATTACCGATT CTCCCTATGT CGTCACGAAT ATGCGTATCA TGACGCGGAT GGGTATCAAG GTTATGGAGT TGCTGGGTGA AAACAGCGAT TTTGTGCCTT GTCTGCACTC TGTCGGCGCT CCGCTCCAGC CTGGTGAGCA GGATGTTGCC TGGCCCTGCA ACGATACCAA ATACATTGTT CATTTTCCTG AAGAGCGCTC TATTGCCTCT TTTGGCAGCG GTTATGGTGG CAACGCCTTG CTTGGCAAGA AATGCTTTGC CCTTCGCATT GCCTCTTCAA TGGCACGGGA TGAAGGGTGG CTGGCTGAGC ACATGCTGAT TCTCGGTGTT GAATCGCCGG ACGGAGAAAA AACCTACATT GGTGGAGCGT TTCCGAGCGC CTGCGGTAAA ACCAATTTTG CGATGCTCAT TCCGCCTCAA TCTTTTGATG GGTGGAAGGT GACCACCATT GGTGATGATA TTGCCTGGAT CAAGCCAGGT GAAGATGGTC TTCTTCGTGC GATCAATCCT GAATATGGCT TTTTTGGTGT TGCTCCCGGC ACGTCGGATA AATCCAATCC GAACGCCATG GCAACGCTTG CGAAGAACTG TATTTTTACC AATGTCGCCA TGACGCCTGA TGGTGATGTC TGGTGGGAAG GGATGACCGA TGAGGCGCCT GAGCATCTTA TCGACTGGCA GGGTCAGGAA TGGACTCCTG ATTGCGGCCG ACTCTCTTCA CACCCCAATG CCCGCTTCAC CTCTCCGGCA AATCAGTGCC CCTCCCTTGA TGCTGACTGG GAAGATCCCA AAGGGGTGCC GATCAGTGCC TTCATCTTTG GTGGTCGTCG CGGAGATACT GTTCCTCTTG TCTACCAGTC AGCAAACTGG AATTCGGGCG TATACCTTGC TGCAACCATG GGTTCTGAAA AGACCGCCGC TGCGGCAGGA AAGGTTGGTG ATGTTCGTCG TGATCCTTTT GCCATGATTC CTTTCTGCGG TTATCATATG GGCGACTATT TCAACCATTG GCTTCATGTC GGGCGTACCT TGCCTGAACT GCCAAGAATT TTTGGTGTCA ACTGGTTCCG AAAGGATGAG AATGGCAAGT TCCTCTGGCC AGGTTTTGGT GAAAACATGA GGGTGCTGAA GTGGATTGTT GATCGTGTTC GTGGCACAGC CGGAGGTGTA GAGAGTCCTC TTGGGTGGAT GCCGAAGTAT GATATGATTG ACTGGACGGG TCTGGAAGAG ATGACTGAAG AGAAGTTTAT CAAGCTGATG TCGGTTGATC GTGAAGCGTG GAAGAAAGAG CTGCTTTCAC ATGAGGCGCT TTTCGAGACG ATATATGATC GACTTCCCAA GGAGTTTCCC CATATTCGTG AACTGATGCT CTCAACGCTC TGGATGTCTC CTGCACACTG GTCGCTGGCT CCGGAACATT ATTCTGAAGG CTGA
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Protein sequence | MQMNPPDYVK NKKLIQWVQE MAEQCCPSTI HWCDGSEEEY DILARQMVES GTFIKLSEEK RPNSYLCRSD PSDVARVEDR TYICSIRRQD AGPTNNWVAP REMKETLKGL FKGCMTGRTM YVIPFSMGPL GSPIAHIGVE ITDSPYVVTN MRIMTRMGIK VMELLGENSD FVPCLHSVGA PLQPGEQDVA WPCNDTKYIV HFPEERSIAS FGSGYGGNAL LGKKCFALRI ASSMARDEGW LAEHMLILGV ESPDGEKTYI GGAFPSACGK TNFAMLIPPQ SFDGWKVTTI GDDIAWIKPG EDGLLRAINP EYGFFGVAPG TSDKSNPNAM ATLAKNCIFT NVAMTPDGDV WWEGMTDEAP EHLIDWQGQE WTPDCGRLSS HPNARFTSPA NQCPSLDADW EDPKGVPISA FIFGGRRGDT VPLVYQSANW NSGVYLAATM GSEKTAAAAG KVGDVRRDPF AMIPFCGYHM GDYFNHWLHV GRTLPELPRI FGVNWFRKDE NGKFLWPGFG ENMRVLKWIV DRVRGTAGGV ESPLGWMPKY DMIDWTGLEE MTEEKFIKLM SVDREAWKKE LLSHEALFET IYDRLPKEFP HIRELMLSTL WMSPAHWSLA PEHYSEG
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