Gene Ppha_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0050 
Symbol 
ID6462941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp47709 
End bp49562 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content51% 
IMG OID642726353 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_002017024 
Protein GI194335230 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.465134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATGA ATCCGCCGGA CTATGTGAAA AACAAAAAGC TGATCCAATG GGTGCAGGAG 
ATGGCTGAGC AATGTTGTCC GAGTACCATA CACTGGTGTG ACGGTTCAGA GGAAGAGTAC
GACATCCTTG CCCGCCAGAT GGTAGAGAGT GGTACGTTTA TCAAATTGTC GGAAGAGAAG
CGCCCGAACA GCTATCTCTG CCGTTCGGAC CCGAGTGATG TTGCAAGGGT TGAAGACAGA
ACCTACATCT GCAGTATTCG CCGCCAGGAT GCAGGTCCAA CCAACAATTG GGTCGCTCCG
AGGGAGATGA AAGAGACCCT GAAAGGGCTT TTCAAGGGCT GTATGACTGG CCGAACCATG
TATGTTATTC CTTTCAGCAT GGGGCCTCTT GGGTCTCCCA TTGCCCATAT CGGTGTCGAA
ATTACCGATT CTCCCTATGT CGTCACGAAT ATGCGTATCA TGACGCGGAT GGGTATCAAG
GTTATGGAGT TGCTGGGTGA AAACAGCGAT TTTGTGCCTT GTCTGCACTC TGTCGGCGCT
CCGCTCCAGC CTGGTGAGCA GGATGTTGCC TGGCCCTGCA ACGATACCAA ATACATTGTT
CATTTTCCTG AAGAGCGCTC TATTGCCTCT TTTGGCAGCG GTTATGGTGG CAACGCCTTG
CTTGGCAAGA AATGCTTTGC CCTTCGCATT GCCTCTTCAA TGGCACGGGA TGAAGGGTGG
CTGGCTGAGC ACATGCTGAT TCTCGGTGTT GAATCGCCGG ACGGAGAAAA AACCTACATT
GGTGGAGCGT TTCCGAGCGC CTGCGGTAAA ACCAATTTTG CGATGCTCAT TCCGCCTCAA
TCTTTTGATG GGTGGAAGGT GACCACCATT GGTGATGATA TTGCCTGGAT CAAGCCAGGT
GAAGATGGTC TTCTTCGTGC GATCAATCCT GAATATGGCT TTTTTGGTGT TGCTCCCGGC
ACGTCGGATA AATCCAATCC GAACGCCATG GCAACGCTTG CGAAGAACTG TATTTTTACC
AATGTCGCCA TGACGCCTGA TGGTGATGTC TGGTGGGAAG GGATGACCGA TGAGGCGCCT
GAGCATCTTA TCGACTGGCA GGGTCAGGAA TGGACTCCTG ATTGCGGCCG ACTCTCTTCA
CACCCCAATG CCCGCTTCAC CTCTCCGGCA AATCAGTGCC CCTCCCTTGA TGCTGACTGG
GAAGATCCCA AAGGGGTGCC GATCAGTGCC TTCATCTTTG GTGGTCGTCG CGGAGATACT
GTTCCTCTTG TCTACCAGTC AGCAAACTGG AATTCGGGCG TATACCTTGC TGCAACCATG
GGTTCTGAAA AGACCGCCGC TGCGGCAGGA AAGGTTGGTG ATGTTCGTCG TGATCCTTTT
GCCATGATTC CTTTCTGCGG TTATCATATG GGCGACTATT TCAACCATTG GCTTCATGTC
GGGCGTACCT TGCCTGAACT GCCAAGAATT TTTGGTGTCA ACTGGTTCCG AAAGGATGAG
AATGGCAAGT TCCTCTGGCC AGGTTTTGGT GAAAACATGA GGGTGCTGAA GTGGATTGTT
GATCGTGTTC GTGGCACAGC CGGAGGTGTA GAGAGTCCTC TTGGGTGGAT GCCGAAGTAT
GATATGATTG ACTGGACGGG TCTGGAAGAG ATGACTGAAG AGAAGTTTAT CAAGCTGATG
TCGGTTGATC GTGAAGCGTG GAAGAAAGAG CTGCTTTCAC ATGAGGCGCT TTTCGAGACG
ATATATGATC GACTTCCCAA GGAGTTTCCC CATATTCGTG AACTGATGCT CTCAACGCTC
TGGATGTCTC CTGCACACTG GTCGCTGGCT CCGGAACATT ATTCTGAAGG CTGA
 
Protein sequence
MQMNPPDYVK NKKLIQWVQE MAEQCCPSTI HWCDGSEEEY DILARQMVES GTFIKLSEEK 
RPNSYLCRSD PSDVARVEDR TYICSIRRQD AGPTNNWVAP REMKETLKGL FKGCMTGRTM
YVIPFSMGPL GSPIAHIGVE ITDSPYVVTN MRIMTRMGIK VMELLGENSD FVPCLHSVGA
PLQPGEQDVA WPCNDTKYIV HFPEERSIAS FGSGYGGNAL LGKKCFALRI ASSMARDEGW
LAEHMLILGV ESPDGEKTYI GGAFPSACGK TNFAMLIPPQ SFDGWKVTTI GDDIAWIKPG
EDGLLRAINP EYGFFGVAPG TSDKSNPNAM ATLAKNCIFT NVAMTPDGDV WWEGMTDEAP
EHLIDWQGQE WTPDCGRLSS HPNARFTSPA NQCPSLDADW EDPKGVPISA FIFGGRRGDT
VPLVYQSANW NSGVYLAATM GSEKTAAAAG KVGDVRRDPF AMIPFCGYHM GDYFNHWLHV
GRTLPELPRI FGVNWFRKDE NGKFLWPGFG ENMRVLKWIV DRVRGTAGGV ESPLGWMPKY
DMIDWTGLEE MTEEKFIKLM SVDREAWKKE LLSHEALFET IYDRLPKEFP HIRELMLSTL
WMSPAHWSLA PEHYSEG