Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0032 |
Symbol | |
ID | 6463060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 30963 |
End bp | 31736 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642726334 |
Product | protein of unknown function UPF0153 |
Protein accession | YP_002017006 |
Protein GI | 194335212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.107691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACT TCCTTGACAA GCTCGGTATA GAACTCAATG AACAAACCAG ACTAACCAGC GAAAGCACCT TTCAGTTCAG TTGCCACAAA GGGCTTTCGT GCTACAACAA CTGCTGCAGC AATCCCGATA TTTTCCTCAC TCCGTATGAC ATCCTGAGGA TGAAGAACAG GCTCGGTCTC TCGTCAGCCG AATTTCTTTC GGCATACACC GAACCGGTAA TCCAGCAAGA ATCGAAGCTC CCTTTTGTCA GGCTGAAACT GCACGATGAG GGCAAGTGCA AATTTGTTGC AGAAGAGGGG TGTACCGTTT ACAATGACCG GCCTCTGGCA TGTCGTTATT ACCCGATCGG CTTCGGCATC CACAAAAACG CAACGGCAGG AGGAAACGAC TTCTATTTTC TCATAAAAGA AGCGCACTGC AAGGGGTTTG AGGAAGAACA GGAGTGGACA GTCGGAGAGT GGCGAAAAAG CCAGGAGATC GATGACTATG ACGACAAAAA CAGGGTCTGG ATGGACATCA TTCTCGACAA AAAACTGCTG AGTCCCGAAC TCGAACCAAA TGAAAAAAGC CTGAAAATGT TTTTCATGGC CAGCTATGAC CTCGATGCCT TCAGGGACTT TATGATGGAA AGCCGCTTCC TTCAGGTGTT CGAGGTAGAT GATGAACTGC TTCAAATGGT AAAAACCGAC GAAGCAGAAC TGATGCTCTT CGCCCACCAA TGGCTGCAGT ACGCCCTCTT CAAAAAACCA ACCATGACGC TGCGGCAATC ATGA
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Protein sequence | MENFLDKLGI ELNEQTRLTS ESTFQFSCHK GLSCYNNCCS NPDIFLTPYD ILRMKNRLGL SSAEFLSAYT EPVIQQESKL PFVRLKLHDE GKCKFVAEEG CTVYNDRPLA CRYYPIGFGI HKNATAGGND FYFLIKEAHC KGFEEEQEWT VGEWRKSQEI DDYDDKNRVW MDIILDKKLL SPELEPNEKS LKMFFMASYD LDAFRDFMME SRFLQVFEVD DELLQMVKTD EAELMLFAHQ WLQYALFKKP TMTLRQS
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