| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0027 |
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| Symbol | |
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| ID | 6462772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 25181 |
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| End bp | 26938 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642726329 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_002017001 |
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| Protein GI | 194335207 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0975231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGCA ACGAAAAGAG GAGCAGGGGC TGGTTGTGGA GAGGCTCTTT GCGACAGGGT
TTGCTGGCCC TTATGGGCGC ATTTTTTTTC TTTTCAGCAC ACTCTCCTGC ACTCCTCCTC
TCAGCGGAGC CTGCCCGGTT GGCTCCCGCT GACTCTGCCA GTTCTGCTGA CAGAGAGTAT
TTTGATATTG TCAAAAGTAT TGACCTTTTC AGTGAGGTCT ATAGTGAGGT CTCAAAAGGC
TATGTTGATA CGCTGAATGT CAGTGGGTTG ATGTATGCCG GTATCGATGG CATGCTTCGT
ACCCTTGATC CGTATACGGT TTTTCTGGAC GAAAATGATG CGGATGAACT CGATGAGCTG
ACCAGCGGGC ACTATGCCGG TATCGGCATT ACGATTGCCT CTGTTGACAC TTTGTTTTAT
GTTACATCGG TTGTTGATGG CTATGCTGCG GCAAAAGCGG GCCTCAGGAT TGGGGACACT
ATTGTTGCTA TCAACGGTCG GGAGATCAGG ACAATGTCGC TGGATGAGGT TAAAACCCTG
ATCAAGGGGC CTGCCGGTTC ACCGATTACC TTCCTGATTG AGCGTCAGGG CGTCCCCTCT
TTTTCCTCGA CACTGATGCG GGAGGAGGTG CGGGTGAGCA CCGTAAGTTA TTCCGGTATT
CTTGACGGTA CGGGCTATAT CGAGATGAAG AGTTTCGGTT CCCATTCGAT GGATGATCTG
CGTGAAGCCA TTCAGGGCCT TTTGCGTCAG GCCTCAGAGC AGCATTTTCA GCTTAAAGGC
CTGATTCTTG ATCTCAGAAA TAATCCGGGA GGATTGCTTA ATGTTGCCGT TGATGTTGCT
TCGCTCTTTG TCAGTAAAGG CAGTGAAGTG GTATCCATTC GGGGACGTTC TCCGGAAATG
GCTAAATCCT ATGTAACCGC CTCTCCTCCG CTGCTTCCCG CTCTTCCCCT TGTGGTTCTC
ATCAACAGCC AGAGTGCTTC AGCGGCTGAA ATTGTTGCTG GCGCGATTCA GGATCTTGAT
CGCGGGGTTA TTATTGGCGA GCGCTCTTAT GGCAAAGGGC TGGTACAGTC GGTTATACGG
ATTTCCTATA ATAGCTCACT GAAGCTGACG ACGTCGAAAT ACTATACTCC TTCGGGCCGT
TTGATCCAGA AAGAGGTCAA TAATGCGGTG CGTGAATCGC GCAAGGTGAT TCCCGTACCG
CAGGGAGAGA CGGCAACTCA GATTTTCTAT ACCAAAGGAA AGAGAAAAGT GTATGGCGGA
GGTGGTATTC TGCCCGATAT CCAGCTCCCT GAACCGGTTA CCTCTCCTTA TCTTTCGGAG
CTGAACAAGA GGGGCCTCAT CTTTCTTTTT TCTTCCGCGT ATCGTTCCCT GAACCCGGTG
ATGCCTGTGC AGCCACTCGA CCGTGCGGCG GTTATGGTAT CGTTTGCTGA TTTTCTGCAG
CGCAGGAAAT TTGTCTACAC CTCCGATTCC GAACGCCGTT TCAATGAGTT GCGGGAGAGT
ATGAAGAAGG TTCAGTCGAC AAATACGGAG AGTGATTCTC AGAGTGTCAC TGCTTTTCAG
CAGGAGATCG ATCGGCTCAA GAAGCAGGAG ATTACAGCAG AGTCGGAGCA TGTTGCCCAG
GCTCTTGAAG TGGAAATTCT CCGCCATTTC AATGATCGTA TTGCACGAAC GGTAGAAATT
GGGCATGACA CGGCGGTCAA AAAAGCCGTT TGGCTCTTTT CTGATTCCCG TGGTTATTCA
CGGATTCTTC ATCCCTGA
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| Protein sequence | MQSNEKRSRG WLWRGSLRQG LLALMGAFFF FSAHSPALLL SAEPARLAPA DSASSADREY
FDIVKSIDLF SEVYSEVSKG YVDTLNVSGL MYAGIDGMLR TLDPYTVFLD ENDADELDEL
TSGHYAGIGI TIASVDTLFY VTSVVDGYAA AKAGLRIGDT IVAINGREIR TMSLDEVKTL
IKGPAGSPIT FLIERQGVPS FSSTLMREEV RVSTVSYSGI LDGTGYIEMK SFGSHSMDDL
REAIQGLLRQ ASEQHFQLKG LILDLRNNPG GLLNVAVDVA SLFVSKGSEV VSIRGRSPEM
AKSYVTASPP LLPALPLVVL INSQSASAAE IVAGAIQDLD RGVIIGERSY GKGLVQSVIR
ISYNSSLKLT TSKYYTPSGR LIQKEVNNAV RESRKVIPVP QGETATQIFY TKGKRKVYGG
GGILPDIQLP EPVTSPYLSE LNKRGLIFLF SSAYRSLNPV MPVQPLDRAA VMVSFADFLQ
RRKFVYTSDS ERRFNELRES MKKVQSTNTE SDSQSVTAFQ QEIDRLKKQE ITAESEHVAQ
ALEVEILRHF NDRIARTVEI GHDTAVKKAV WLFSDSRGYS RILHP
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