Gene Ppha_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0018 
SymbolrnhB 
ID6463147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp19790 
End bp20410 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID642726322 
Productribonuclease HII 
Protein accessionYP_002016994 
Protein GI194335200 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000692909 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCG ATTACGAATG GCCTCTGTGG CAAACAACGG CACTTGTCTG CGGTATTGAC 
GAGGCGGGCC GGGGGCCACT TGCCGGGCCT GTGGTTGCGG CGGCGGTTAT CTTCCCTCGC 
TGGTTCAGGC CGGTTGGTAC GATACTTGAG AGGGTGAATG ATTCAAAGAA GCTCTCGGCG 
GCCGAGAGGG AATTGCTTGC CCCTGCCATC CGGAATGCGG CGGCTTTCTG GGCGGTTGCT 
GAAGTTGATC CTGAGACCAT TGACCAAATC AACATCCTCC AGGCGACCAT GCTTGCCATG 
AACCAGGCTG TTGCAGCATT ACCGATCCAG CCAGAGCTGC TTCTTGTTGA CGGCAACCGG 
TTCCGCACGG AGCTCCCAAT CCCTTATGAA ACTGTTGTGA AGGGTGATTC GAAGGTCTTT 
TCAATTGCGG CTGCATCGGT GCTGGCCAAA ACCCATCGGG ATGAGCTGAT GGTGGCGTAC 
GCCAGTGAGT ACCCGCAATA CGGTTTTGAG CGCCATGTCG GCTACCCCAC CAGGGCGCAT 
GTCGAAGCTA TCCGCCAGCA TGGACGCTGC CCGATTCACC GCCAGAGCTT CAGGCTTCGT 
CAACTGGGTG AAAAGCCATG A
 
Protein sequence
MITDYEWPLW QTTALVCGID EAGRGPLAGP VVAAAVIFPR WFRPVGTILE RVNDSKKLSA 
AERELLAPAI RNAAAFWAVA EVDPETIDQI NILQATMLAM NQAVAALPIQ PELLLVDGNR 
FRTELPIPYE TVVKGDSKVF SIAAASVLAK THRDELMVAY ASEYPQYGFE RHVGYPTRAH 
VEAIRQHGRC PIHRQSFRLR QLGEKP