Gene Ppha_0007 details

Gene Information

• Locus tag: Ppha_0007
• ID: 6462807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 8136
• End bp: 10001
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642726311
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_002016983
• Protein GI: 194335189
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGATA TCATAGTTAC TGGAGCAGGT CACGCTGGAT GCGAAGCTGC CCTTTCTGCA 
GCAAGAATGG GTTCATCCTG CCTGCTTATC TCCTCTGATC TCACCGCAAT TGCCCGGATG 
TCCTGTAATC CCGCAATAGG AGGCGTCGCA AAGGGGCAAA TCACGAGAGA GATCGATGCC 
CTTGGGGGTG AAATGGCAAA AGCTATTGAC GCCACCGGCA TACAATTCCG AATGCTCAAC 
AGAAGCAAGG GGCCAGCCAT GCACTCTCCA AGAGCGCAGG CTGACCGAAC ATTATACTCA 
CTGTATATGC GGAATGTTAT CGAGAAGGAG GCTAATATTG ATCTTCTCCA GGACACTGTT 
GTTGGTATTG AGTGCTCAGG CGGAGCTTTT TCAGGGGTGC GGCTTATGTC GGGACGTATC 
ATCAATGGCA GGACGGCCAT CCTCTCTTGT GGAACGTTTT TGAATGGCCT GATCCATATT 
GGCATGAATC ATTATGCTGG TGGCCGAACC ATTGCCGAAC CTCCAGTATA CGGGCTAACA 
GAGGATCTTG TTAAATATGG TTTTGCTGCA GGTAGACTAA AAACGGGAAC ACCAGCAAGA 
ATAGATGCGC GATCGGTTGA GTACGATTTG GTTGAAGAGC AATCAGGTGA TCCTCTGCCA 
ATCTCATTTT CATTCAGGAA CACCCCTGTC ATTAACCGGC ATCAGATTAG CTGTTTTGTT 
ACAAAAACAA CAAAAGCAAC ACATGAGATC CTGAAAAAAG GATTTGACCG ATCTCCATTA 
TTTTCAGGGA AAGTTCAAGG TATTGGTCCG AGATATTGCC CATCCATTGA AGATAAAATC 
TGTCGCTTCC CTGACAAGGA TAGCCATCAT ATATTTCTCG AACCGGAAGG GTTCGATACC 
AATGAAATGT ATGTCAATGG CTTTTCAACA TCACTTCCTG AAGAGATTCA GTTAGAAGCG 
CTGCAATCTC TTCCCGGACT CCGTAACGTT AAAATGATAC GCCCTGGATA TGCAATTGAA 
TATGACTACT TTTTTCCTTA TCAAATCAAT AGAAGTCTTG AAACAAAGCT TGTAAAGAAT 
CTCTTTTTTG CAGGGCAGAT TAATGGGACT TCTGGCTATG AAGAGGCCGC AGCACAGGGA 
TTAATTGCCG GAATTAATGC CACACTTCTG CTTCGGGGAC GAGCCCCGCT CCATTTGAAG 
CGCTCAGATG CCTATATCGG CGTACTCATT GATGATCTGG TTACAAAAGA GACGAATGAA 
CCCTACAGAA TGTTTACCTC TTCTGCTGAA CACCGCCTGT TGCTCCGTCA TGACAATGCT 
GATATTCGTC TCTGTCACCA CGCAAAATCT GCAGGACTGA TTGATGCCGA TACCTTTTCT 
GACTGCACCA ATAAAAAAAG GCTCATTGAT ACCCTCAATC AGCTCTGTCT TGACACGAAA 
ATCAAGCCCG ATGTTGCGAA CACGTTACTT GCGGGACTCG GGCATCCACC CGTAACGACA 
ACACAAAGCG CAGTGAACCT GTTAAAAAAA CCAGGCGTAC ATTTTCACAT GCTGCTTGAA 
TCCGCTCTCT CTTTCAAAGA AAGCGTCTAT GCAGTGACTG ACGACCCATT AGTTTTTGAA 
CAGGTTGAGA TTGATCTGAA ATATGAAGGT TATCTTAAAC GGGATCTGTT AATGGCCGAA 
AAAATACTGC GTTTGGATTT GCATGAGATT CCCGCTTCTT TCAGGTACGA TCATGTTACC 
GGCCTTTCAA ATGAGGGAAG GGAAAAACTG ATGAAGCTTC GACCCGAGAC CATAGGACAG 
GCATCGAGAA TTCTTGGTGT CTCGCCATCA GATATTTCTG TGCTCATGAT ACGTCTCGGC 
CGCTGA 

 

Protein sequence

MYDIIVTGAG HAGCEAALSA ARMGSSCLLI SSDLTAIARM SCNPAIGGVA KGQITREIDA 
LGGEMAKAID ATGIQFRMLN RSKGPAMHSP RAQADRTLYS LYMRNVIEKE ANIDLLQDTV 
VGIECSGGAF SGVRLMSGRI INGRTAILSC GTFLNGLIHI GMNHYAGGRT IAEPPVYGLT 
EDLVKYGFAA GRLKTGTPAR IDARSVEYDL VEEQSGDPLP ISFSFRNTPV INRHQISCFV 
TKTTKATHEI LKKGFDRSPL FSGKVQGIGP RYCPSIEDKI CRFPDKDSHH IFLEPEGFDT 
NEMYVNGFST SLPEEIQLEA LQSLPGLRNV KMIRPGYAIE YDYFFPYQIN RSLETKLVKN 
LFFAGQINGT SGYEEAAAQG LIAGINATLL LRGRAPLHLK RSDAYIGVLI DDLVTKETNE 
PYRMFTSSAE HRLLLRHDNA DIRLCHHAKS AGLIDADTFS DCTNKKRLID TLNQLCLDTK 
IKPDVANTLL AGLGHPPVTT TQSAVNLLKK PGVHFHMLLE SALSFKESVY AVTDDPLVFE 
QVEIDLKYEG YLKRDLLMAE KILRLDLHEI PASFRYDHVT GLSNEGREKL MKLRPETIGQ 
ASRILGVSPS DISVLMIRLG R