| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0002 |
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| Symbol | |
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| ID | 6463180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1746 |
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| End bp | 2870 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642726306 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_002016978 |
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| Protein GI | 194335184 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA CCTCTTCGAT CCGTCAATTA CAGGATGCTA TCGGCAAAGT TGCGCAAGCG
ATTCCCGCAA AAACCATTGA TCCGCGTTTT GAAAATGTTC ACCTCTCTAT TGAGTCTGGT
AGCCTGACGT TATTCGCTAC TGATGGTGAG TTATCAATAA CCGCGAAAAG TGATGTAGAA
ACAAGTGATT CTGGTAATAT TGGTGTTAAG GCGAGGACTT TGCAGGATTT TCTGAGAAGT
ATGTACGATA CCGCAGTAAC CTTTGTTATT GAACGGCAGG AAATCAGTGA TCATGGAACT
CTCCATATTA CCACAGACAA AGGCAAGTAT AAAATACCCT GTCAGTTTGA AAGCAAGCAG
GAAAAACATG AAAAAACGTA CGATATCTCT CTTGAACTTG AAACAGCAGA ATTTCTTGAT
CTGATCCAAA AAACAATTTT TGCCTGCAGT GTCGATGGTA TGAGACCCGC AATGATGGGG
GTACTCTTTG AACTTGAAGG TAATACTATT ACCGCAGTTT CGACTGATGG CCATCGGTTG
GTACGATGCA GAAAAAACTA CAACTCTGCA ATTGGAGAAA AACAAAAAAT CGTTATACCG
GCACGCGTCC TTTCAATTTT ACAAAAACTT GCACAGCACG AATTTATTAC CATGAGTATA
GATTCAGATC GCAGGTTTGT TCGTTTTATT ATTGGTAATA TTGTGCTTGA TGCATCCCTG
ATTATTGAAC CATATCCAAA TTATGATGCA GTAATTCCTG TAGAACACGA CAAACATTTA
ATCATAGATC GCTCGATGAT TTATGATTCT GTACGTCGTG TCGGACGTTT TTCAAGTATT
GGAGATGTCA AGATGGTGAT TGAAGGACAG TTACTGAAAG TTATGGCAGA AAATACAAAT
GAGGGTGAGG CTGCACAAGA AGAGATGCCA TGTCTCTATA CGGGAGATGA TATTACTATA
GGTTTTAATT CAAGGTTTAT CGAAGCTGCT CTTGCACATC TCGATGATAA TGAAATCAGA
ATTGAATTGA AAAGTCCAAC AACTGCAGTT ATTTTTAAAC CTCACAAGAC GGAAGAGGAT
GATAAACTGA TTGTGCTTGT TATGCCTGTG AGAATAAATA ATTGA
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| Protein sequence | MKLTSSIRQL QDAIGKVAQA IPAKTIDPRF ENVHLSIESG SLTLFATDGE LSITAKSDVE
TSDSGNIGVK ARTLQDFLRS MYDTAVTFVI ERQEISDHGT LHITTDKGKY KIPCQFESKQ
EKHEKTYDIS LELETAEFLD LIQKTIFACS VDGMRPAMMG VLFELEGNTI TAVSTDGHRL
VRCRKNYNSA IGEKQKIVIP ARVLSILQKL AQHEFITMSI DSDRRFVRFI IGNIVLDASL
IIEPYPNYDA VIPVEHDKHL IIDRSMIYDS VRRVGRFSSI GDVKMVIEGQ LLKVMAENTN
EGEAAQEEMP CLYTGDDITI GFNSRFIEAA LAHLDDNEIR IELKSPTTAV IFKPHKTEED
DKLIVLVMPV RINN
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