| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0001 |
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| Symbol | dnaA |
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| ID | 6461738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1 |
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| End bp | 1464 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642726305 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_002016977 |
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| Protein GI | 194335183 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00605191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAG TTACGTCAAA TACGTTTCAA GGAAAAACCA AGAAAAACAG CTCAATGGAG
CATCAAGTCT GGGAGGCCTG TCTTAATGCC ATAAGGGAAA AGATCAATCC TCTGGCTTTC
AAGACCTGGT TTTTTCCAAT CAAGCCGCTG AGCTTTTCGG GCAGTGAGCT GACAATTGAA
GTTCCCAGCC AATTTTTTTA CGAGTGGATA GAGGAAAATT ATTCCTCCTT TTTAAAACTC
GCACTCAAGG ATGTGATCGG GCCCGAAGCA AAGTTGATGT ATTCAATTGT GATGGATAAA
TCACAAGGGC AACCCGTCAC CATAGAATTG CCACACCAGA ACGCTATGAA CGGCGATTTC
ATTGCCGCAA GTCGCGCAAC AGAAGCACGT GCAAAAAACA GTGAGGAATT TGAAAAAAAC
CTTGCCCGCT TTGAAACACA CCTGAACTCA AAATATACCT TTGATACACT CATCAGGGGT
GACTGTAATT CTCTGGCTTT TGCAGCTTCA AAATCTGTTG CGCAAAGCCC CGGTCAAAAT
GCTTTTAATC CCCTGGTTAT TTATGGCGGA GTAGGTCTTG GCAAAACACA CATGATGCAG
GCTATCGGTA ACAGTGTCCG TGAGAACCGG TTATCGGAAA GAGTGCTCTA TGTATCAAGT
GAAAAATTTG CAATCGACTT CGTCAACGCT ATTCAGAATG GAAAAATACA GGAATTTTCC
TCGTTTTACC GCTCAATCGA CGTACTGATT ATTGACGATA TTCAGTTTTT TTCGGGCAAG
GAAAAAACAC AGGAGGAAAT TTTTCATATT TTCAACACCC TGCACCAATC AAACAAGCAG
ATTATTCTCT CGGCAGACAG ACCCATCAAA GATATCAAGG GAATTGAAGA CCGTTTGATC
TCACGCTTTA ACTGGGGACT TTCAGCAGAC ATTCAACCTC CTGATTATGA GACCCGCAAG
GCTATTATCC TCAGCAAACT CCATCAAAGC GGTGTGAATC TGGATGAAAC CGTTATTGAA
TTCATTGCGA CCAATGTCAC CGAGAATGTG AGGGAACTGG AAGGATGCAT TGTCAAACTG
CTTGCGGCCC AATCGCTTGA TAACAGGGAA ATTGATCTTC AGTTTACAAA ATCAACACTG
AAAGACATTA TTCGCCACAC AACAAAAAGG CTGACTCTCG ATACGATAGA AAAAGCGGTC
TGCTCTTACT TTTCTATTAC GCCTAATGAT CTGAAGGGAA AATCGAAAAA GAAGGAGATC
GCCGTTGGAC GACAGGTGGC GATGTATCTG TCGAAACTTC TGACCGATTC TTCACTGAAA
ACTATCGGCC TTCATTTTGG AGGAAGAGAC CACTCAACCG TTATCCATGC TGTTAACACT
ACCACAAAAA AAGTTGACAC GATCGGGGAT GAACGAAAAA AAATAGAAGA GATCAAAAAA
AGAATAGAGA TCCTCTCCAT GTAG
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| Protein sequence | MLEVTSNTFQ GKTKKNSSME HQVWEACLNA IREKINPLAF KTWFFPIKPL SFSGSELTIE
VPSQFFYEWI EENYSSFLKL ALKDVIGPEA KLMYSIVMDK SQGQPVTIEL PHQNAMNGDF
IAASRATEAR AKNSEEFEKN LARFETHLNS KYTFDTLIRG DCNSLAFAAS KSVAQSPGQN
AFNPLVIYGG VGLGKTHMMQ AIGNSVRENR LSERVLYVSS EKFAIDFVNA IQNGKIQEFS
SFYRSIDVLI IDDIQFFSGK EKTQEEIFHI FNTLHQSNKQ IILSADRPIK DIKGIEDRLI
SRFNWGLSAD IQPPDYETRK AIILSKLHQS GVNLDETVIE FIATNVTENV RELEGCIVKL
LAAQSLDNRE IDLQFTKSTL KDIIRHTTKR LTLDTIEKAV CSYFSITPND LKGKSKKKEI
AVGRQVAMYL SKLLTDSSLK TIGLHFGGRD HSTVIHAVNT TTKKVDTIGD ERKKIEEIKK
RIEILSM
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