| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2142 |
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| Symbol | |
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| ID | 6458442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 2319580 |
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| End bp | 2320266 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642726120 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002016793 |
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| Protein GI | 194334933 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.540844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.912393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAGCA AAAAAGTAGC ATTGATCACG GGAGCTGCCG GGGCTCTTGG CAGCGCGACC
GCTGCAACAT TCAAAAAAGC CGGTTATCGA CTCTCTCTTC TTGACATGAA TATCAAGCCA
CTTCAGGAAC GGTGGGAAGG CAAAGAGCAT GTCACCTGCT TACCATGCGA CCTGACCGAT
GCCGGCAACA TTGAGGATGC CGTCGATAAG ACGGTCCGTA TGTACGGGTC GATCGACACC
CTCCTCACAA TCGCAGGCGG TTTTGCTATG GGACCGCAAA TACATGAACT GACCGAGGAA
AAGTGGGATT CAATGCAGAA CATGAATCTC AGAACAGTCT TTCTCGCCGC ACGGGCGGTA
CTCCCGCACA TGCGCAAGCA ACAAAGCGGA AGTATCGTTA CCATCGGGGC ACAAACAGCT
CTCCATGGCG CAGCGAATCT GGCCCCTTAC GTTGTCTCCA AATCGTCAGT CATACGGCTG
ACTGAATGCA TGGCCCAAGA AAACCAAAAG AAAGGCATCC GCGTCAATTG CATTCTTCCC
TCGGTCATCG ATACCCCCGC AAACAGAGCC GATATGCCTG ATGCCGATTT CTCGAAATGG
ACCAAACCTG AGGCAATTGC CGACGTACTT CTTTTTCTCG CATCAGACGC ATCCAAAGCT
GTTAACGGAG CATCGATACC CGTCTGA
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| Protein sequence | MQSKKVALIT GAAGALGSAT AATFKKAGYR LSLLDMNIKP LQERWEGKEH VTCLPCDLTD
AGNIEDAVDK TVRMYGSIDT LLTIAGGFAM GPQIHELTEE KWDSMQNMNL RTVFLAARAV
LPHMRKQQSG SIVTIGAQTA LHGAANLAPY VVSKSSVIRL TECMAQENQK KGIRVNCILP
SVIDTPANRA DMPDADFSKW TKPEAIADVL LFLASDASKA VNGASIPV
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