Gene Paes_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2140 
Symbol 
ID6459269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2317658 
End bp2318224 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID642726118 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002016791 
Protein GI194334931 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0385915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.823652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGC AAAAAAATTA TGGAATGGTT ATCGATACAC GGGTCTGCGT AGGATGCTCC 
GCGTGTGTCT ATATCTGCAA GTCCGAAAAC AGCGTCCCTG AAGGCTACTG CCGCGACTGG
GTCGTTCAGG ACACCGAAGG AACATATCCG AAACTGCGCA TGGAAAACCG CTCGGAACGC
TGTCAGCATT GCGAAAACGC CCCATGCGTT ACCTACTGCC CTACAGGGGC TTCACACTAT
GCCGAAGACG GCACCGTACA GGTCAACCGC AGCCGTTGTA CCGGCTGTAA GGCTTGTCTG
GCTGCATGCC CGTATGATGC GCGCTACGTC CATCCTGAAG GCTTTGTTGA TAAATGCTCG
CTCTGCAAGC ATCGTCTTGA CCAGGGCCTT GAAACGGCAT GCGTATCGGT CTGCCCGACA
AAAAGCCTCA ATCTGGTCGA TTACAACGAC CCGGAACAGA AGGCTCAGCA CATGATGAAT
GGTAAAGTGG TTTACCGGCA GAAGGAACAT GCCGGAACCA ATCCGAGCCT CTACTGGATT
TCAGCAAGTA ATAAACCCGG AGCCTAA
 
Protein sequence
MAKQKNYGMV IDTRVCVGCS ACVYICKSEN SVPEGYCRDW VVQDTEGTYP KLRMENRSER 
CQHCENAPCV TYCPTGASHY AEDGTVQVNR SRCTGCKACL AACPYDARYV HPEGFVDKCS
LCKHRLDQGL ETACVSVCPT KSLNLVDYND PEQKAQHMMN GKVVYRQKEH AGTNPSLYWI
SASNKPGA