| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2116 |
|---|
| Symbol | |
|---|
| ID | 6458433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2295649 |
|---|
| End bp | 2297076 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642726094 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002016767 |
|---|
| Protein GI | 194334907 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000436427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.738755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATC AGAAAAAAGT ACTCCTTGTC TTTCTGGCAT CAAACAGCGG AGTTGACGGT
GCCCGCTCGA TCCACGAACA GGCTGGAAAA CAGGGGCCGG CTGCATGGTT TGAACGCTCA
GTCAGAAACA TCATCAAAAA AAGCCAGTTT GCGATCCCCT CTCTGGCCCT CATGATCCTC
GCATCAGTTG ACGTTGAAGG CGTCCACCAG CAGATCTGCG ATCTGCGCTT TGAGGAACTC
CCGCTTGACA AAGCGTGGGA CCTCATCGCC ATCAGCGTGC AGACAGGAAC TGCCGCCCAG
GCATTCTCCC TTTCGGACAT GCTCCGTGAA AAAGGGTTCC GTGTCGCGCT CGGCGGGGCG
CATGTCACCA TGTTTCCCGA CAACTGCAGA GCGCATGCCG ATGTCCTTGT TCTGGGCGAA
GCTGACGAGA TCTGGCCCGA CGTGCTTGAA GACCTGAAAA ACGATCAACT GCAACAGCGC
TATGAGTCCG AACGTTTCCC TGACCTCTTC AGATCAAGAC CCGTTCAGTC AACCGTACTG
CAGAAAAACC GGTATTTTAC GACCAATATC ATACAGACCG GACGCGGCTG CCCATTCAAC
TGCGACTTCT GCAACGTCCA TATCCTCAAC GGAAACAAGC ACCGGCGACG GCGCGTCGCG
GATATCGTCG AAGAGGTAAG GCGCTTCAAA AGCCACGACA ACAGAATTTT CTTTTTCGTC
GACGATTCCA TCAACGCAAG CCCTGAATAC GCAGAAGAAC TCTTCAGGCA GCTTATCCCC
CTCAACATCA CATGGTTCGG GCAAGCCACA ACCATGCTTG GTGCCCAGCC CGGCTTGCTC
AAAACCTTTG CCCGTTCAGG CTGCGTCGCA CTGCTTGTCG GTATTGAAAG CGTCGAACCG
GCAAGCCGCA AAGCACATCA GAAGAACCAG AACCGCGCAG CTGAACTGGT TCAGAACATC
AAAAACATCC GTGACGCAGG CATCAGTCTC TATGGCAGCT TCATTTACGG ACTCGACGGA
GACACCCTCG ATACGCCAGC AGCGATTATC GACTTCAGCC GTCAGACAGG CCTTGACGTC
CCGGGAATCA ATATTCTGAG GCCCAATCCG GGAACCAGAG TCTTCGAACG CCTCAGGGCG
GAAGGGCGCC TGCTGTTTAA CCCGGACGAT ATCAGTACCT ATCGATACAC CTTCGGTCAG
GAAATGCTCT ACCAGCCAAA AAACATATCC ATGCCTGATT TCATCGAAAG TTACTCGCGA
CTCACCAAAG AACTCTTCAC CATAAGACGG TCGCTGCAAC GAGGATTGAA CGCGCCAAAC
GCCAAAGCAG CCGTGACCTT CTTCAACCTG TTCTACACAC ATCTCTACAC GCTGTCGCGT
AACGATCTCC AACAGCAGCT GCCCGGCGGA AACAAGGATC GGCCCTGA
|
|---|
| Protein sequence | MNNQKKVLLV FLASNSGVDG ARSIHEQAGK QGPAAWFERS VRNIIKKSQF AIPSLALMIL
ASVDVEGVHQ QICDLRFEEL PLDKAWDLIA ISVQTGTAAQ AFSLSDMLRE KGFRVALGGA
HVTMFPDNCR AHADVLVLGE ADEIWPDVLE DLKNDQLQQR YESERFPDLF RSRPVQSTVL
QKNRYFTTNI IQTGRGCPFN CDFCNVHILN GNKHRRRRVA DIVEEVRRFK SHDNRIFFFV
DDSINASPEY AEELFRQLIP LNITWFGQAT TMLGAQPGLL KTFARSGCVA LLVGIESVEP
ASRKAHQKNQ NRAAELVQNI KNIRDAGISL YGSFIYGLDG DTLDTPAAII DFSRQTGLDV
PGINILRPNP GTRVFERLRA EGRLLFNPDD ISTYRYTFGQ EMLYQPKNIS MPDFIESYSR
LTKELFTIRR SLQRGLNAPN AKAAVTFFNL FYTHLYTLSR NDLQQQLPGG NKDRP
|
|---|
| |