Gene Paes_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2113 
Symbol 
ID6458420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2292626 
End bp2293741 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content52% 
IMG OID642726092 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_002016765 
Protein GI194334905 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.82338e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.988223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA CACCAGCGAA ACTTGTTTTA GAAAACGGCT CTGTTTATAC AGGATACGCA 
TTTGGACACA TTGGTGAAAC CGGAGGCGAA GTCGTCTTCA ATACCGCACT GACAGGGTAC
CAGGAAATTG TCACCGACCC GTCCTATGCA GGACAGATGG TCGTCATGAC CTATCCGCTG
ATCGGCAATT ACGGAGTCAA TCAGAGCGAT GCAGAATCTC AGAAAATCTG GGCCTCGGCG
CTCATTGTGC GTGAGATGTC TAACATCCAT AGCAATTTTG CCGCTACCGG AAGCCTTGAC
CAATACCTCA AAGAGGCCAA AGTAATGGGT CTTGCAGGCA TCGACACCAG AAAACTGGTT
CGTGAAATCC GCCAGAAAGG CGCCATGAGA GGAGTCATAT CGGCCATCGA TCCCGATGAA
AAACGTCTGG AGGAAAAAGC GCTGAAAATA CCTGAAATGA CCGGACTTGA CCTCGTCAAG
AAAGTCAGCA CATCCCAGAC ATACACCATC GATTGTGACG ATGCGGAATA CCATGTGGTC
GCCTATGATT ACGGCATCAA GCAGAACATT CTGCGCATGC TCCAGAATGC GAAATGCAAG
GTGACGGTCC TCAATGCCAA CACGCCGATC GAGGAAGCGC TGAAGCTCGA TCCGGACGGT
ATCTTTCTGT CTAACGGCCC AGGCGATCCC TTTGCCGTCA CCTACGCCAT CGACAACATC
AAGAAACTCG CAGAACACAA TACGCAACAA AAGCCTGTGC CGCTGTTCGG CATATGCCTG
GGACATCAGC TCATGTCGCT CGCCTTCGGT GCAAAGACCT ACAAACTGAA ATTCGGGCAT
CACGGCAGTA ACCATCCGGT CAAGAACCTG AAATCGAGTT CTATTGAGAT CACATCCCAG
AACCACGGGT TTGCCGTAGC AATGGAATCC CTGCCGGAGT CGCTGGAAAT GACCCATCTC
AACCTGTATG ACCAGACGGT TGAAGGTGTC CGGCACAAAA AGCTTCCATG CTTCTCAGTC
CAGTATCACC CTGAGGCTGC ACCGGGACCG CACGACTCGC ACTACCTCTT CGAGCAGTTC
ACCGCCATGA TGGATCAAGC AAAAGAGAAC GTCTGA
 
Protein sequence
MQQTPAKLVL ENGSVYTGYA FGHIGETGGE VVFNTALTGY QEIVTDPSYA GQMVVMTYPL 
IGNYGVNQSD AESQKIWASA LIVREMSNIH SNFAATGSLD QYLKEAKVMG LAGIDTRKLV
REIRQKGAMR GVISAIDPDE KRLEEKALKI PEMTGLDLVK KVSTSQTYTI DCDDAEYHVV
AYDYGIKQNI LRMLQNAKCK VTVLNANTPI EEALKLDPDG IFLSNGPGDP FAVTYAIDNI
KKLAEHNTQQ KPVPLFGICL GHQLMSLAFG AKTYKLKFGH HGSNHPVKNL KSSSIEITSQ
NHGFAVAMES LPESLEMTHL NLYDQTVEGV RHKKLPCFSV QYHPEAAPGP HDSHYLFEQF
TAMMDQAKEN V