| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2111 |
|---|
| Symbol | |
|---|
| ID | 6459329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2291608 |
|---|
| End bp | 2292180 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642726090 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_002016763 |
|---|
| Protein GI | 194334903 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000015424 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG GACCATTCGG CATCCTCGTC ATCCTTTTTT CACTCCTGAT CGCGCTCGGA
CCGGGCACCG GCCTGGGTGC CACTTCAACA AGCGCGGACC CGGAAAACAC CATCTATCTC
GATATTCCTG CCGGTAGAGT GGTCATTGAG CTGCTTCCTG AAAAAGCACC GAACCACGTC
GCGCGCATCA AGGAGCTCAC CCGACAGGGG TTTTATGACG AACTGGCATT CCACCGGGTT
ATTCCGGGAT TCATGGCTCA GACGGGGGAT CCTCGCGGCA ACGGTACGGG GGGAACAGGT
CAGACATTGA AAGCGGAATT TTCCAGCGAG CCGCATATTC GTGGAACTGT TTCGATGGCG
CGGGCTGACG ATCCCGACAG CGCAGACAGC CAGTTTTTCA TCTGCCTCGC TCCGGCGCGG
TTTCTCGACG GCCGTTATAC GGTCTGGGGG AAAGTCGTCT CGGGCATGGA GTTCGTCGAC
AGAATCAAGA CGGGAACCAA AGCCAACAAC GGCACCGTCG CCAATCCGAC GAGGATTGTA
CGCATGCGTG TAGCAGCAGA TGGCGACCAA TGA
|
|---|
| Protein sequence | MKTGPFGILV ILFSLLIALG PGTGLGATST SADPENTIYL DIPAGRVVIE LLPEKAPNHV
ARIKELTRQG FYDELAFHRV IPGFMAQTGD PRGNGTGGTG QTLKAEFSSE PHIRGTVSMA
RADDPDSADS QFFICLAPAR FLDGRYTVWG KVVSGMEFVD RIKTGTKANN GTVANPTRIV
RMRVAADGDQ
|
|---|
| |