| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2080 |
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| Symbol | gatB |
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| ID | 6460664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2263123 |
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| End bp | 2264568 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642726064 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002016737 |
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| Protein GI | 194334877 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTATG AATTAGTTGT GGGCCTTGAA GTCCACTGTC AGTTAAATAC GAACAGCAAA
GCGTTCTGCG GCTGTTCGAC CGAGTTCGGC AAACCGGCAA ACACCAATGT TTGTCCGGTT
TGTCTGGCTT TACCGGGGGC CCTGCCGGTC CTGAACCAGA GAGTTGTCGA CGATGCCATC
AAGCTTGGGA TGTCAACAGG TTGTTCCATC GCGCCTCATT CTGTTCTTGC CAGGAAAAAC
TATTTTTATC CCGATCTGCC GAAAGGATAT CAGATTTCAC AGTTTGAAGA ACCTATCTGT
CTTGAGGGTT GTCTATCGAT CGATGCGGGT GAGGGGCAGA GGGATATACG TCTGATTCGA
ATACACATCG AAGAGGATGC CGGTAAATCT ATTCACGATA TCGGTGACGA TACCTTTATC
GATGCCAACC GGAGTGGCGT TCCTCTTCTT GAAATAGTCA GTTACCCCGA TATCCGTTCT
TCGAAAGAGG CTTCGGCATA TCTGCAGAAG CTGCGTCAGA TTGTCAAATA TCTCGGTATT
TCCGATGGGA ATATGGAGGA GGGCAGTCTT CGTTGTGATG CCAACGTGTC GATGCGCCCG
AGAGGCGAGA GCGAATACGG CACGAGAACC GAGATCAAGA ATATGAACTC GTTCAAGAGC
GTTGAAAAGG CGATCGAGTA TGAAGCGCAG CGTCATATTG ACGTGCTTGA AGCCGGAGGA
ACCATTGTTC AGGAAACCCG TCTCTGGGAT GCCGACAAGC TTGAAACCCG TTCCATGCGC
GGCAAGGAGT TCTCTCATGA CTACCGGTAT TTTCCGGACC CTGATCTGGT TCCGATCGCT
GTTGACGATG CAATGCTTGA TCGTCTCCGA AAAGAACTTC CCGAGTTTCC CGAGGCCCGT
GCTGCCCGTT TTGTCGAGGA GTACGATATT CCGCCATATG ATGCAGGCGT CTTGACTGCG
GAACGTGAAA TCGCCGATTA CTTCGAGGAG ACGGTGAGGG TTTCCGGTGA TGGAAAAGCT
GCTTCAAACT GGGTCATGGG CGAGGTGCTC CGGACCCTTA AAGAGAAGTA TATTCCGATT
GCCTCCTTTA CTATTTCGCC TGAGCGGCTC GGTGAACTGA TAGGCCTCAT CGCGAAGGGA
ACGATCAGTA ACACCATCGC CAAGCAGGTT TTCGAGAAAA TGCAGGAGCT TGACGAGGGG
CCGCAGGAAA TTGTCAGGAA AGAAGGCCTT GCTCAGGTTT CAGATACCGG TGCGATCGAG
GGTGTCGTTC AGGAGATTAT TGATGCTAAC CCGGCACAGG TTGAACAGTA CAGGAGCGGT
AAAACCAGGA TTTTCGGCTT TTTTGTCGGA CAGTGTATGA AAGAGATGAA AGGCAAGGCC
AATCCTGCGG TGGTCAATGA TATTCTGAAA CAGAAACTTG ATGAGGGTAT GACGGGCGAT
GCCTAA
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| Protein sequence | MSYELVVGLE VHCQLNTNSK AFCGCSTEFG KPANTNVCPV CLALPGALPV LNQRVVDDAI
KLGMSTGCSI APHSVLARKN YFYPDLPKGY QISQFEEPIC LEGCLSIDAG EGQRDIRLIR
IHIEEDAGKS IHDIGDDTFI DANRSGVPLL EIVSYPDIRS SKEASAYLQK LRQIVKYLGI
SDGNMEEGSL RCDANVSMRP RGESEYGTRT EIKNMNSFKS VEKAIEYEAQ RHIDVLEAGG
TIVQETRLWD ADKLETRSMR GKEFSHDYRY FPDPDLVPIA VDDAMLDRLR KELPEFPEAR
AARFVEEYDI PPYDAGVLTA EREIADYFEE TVRVSGDGKA ASNWVMGEVL RTLKEKYIPI
ASFTISPERL GELIGLIAKG TISNTIAKQV FEKMQELDEG PQEIVRKEGL AQVSDTGAIE
GVVQEIIDAN PAQVEQYRSG KTRIFGFFVG QCMKEMKGKA NPAVVNDILK QKLDEGMTGD
A
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