| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2067 |
|---|
| Symbol | |
|---|
| ID | 6459162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2250318 |
|---|
| End bp | 2252432 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642726051 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_002016724 |
|---|
| Protein GI | 194334864 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000338261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.439953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGC AAGTAGGTTT AGATAAGGTT CGCAACATCG GTATCATGGC TCATATCGAT
GCTGGAAAAA CGACGACGAC TGAGAGGATT CTCTATTATA CCGGACGTCT CCATAAAATG
GGAGAGGTTC ACGATGGTGG CGCAACCATG GACTGGATGG AGCAGGAGAA AGAGCGTGGT
ATCACGATTA CTTCGGCTGC GACGACCTGT TTCTGGGAAC CCCGTTACGG AATCTATAAA
GGAAAAAATC ATCGTATCAA TATTATTGAT ACGCCGGGTC ACGTCGATTT TACAGTGGAG
GTTGAGCGCT CTCTGCGAGT GCTTGATGGT GCTGTTGCGC TGTTCTGTGC GGTAGGCGGT
GTCGAGCCCC AGTCGGAAAC GGTCTGGCGT CAGGCCAATA AGTACAATGT GCCAAGGGTC
GCCTACGTTA ATAAGATGGA TCGTGTTGGC GCCGATTTCT TTGAGACTGT CAAGTCTATC
AAAGAGAGGC TTGGTGCTAA TCCTGTGCCG GTCCAGATTC CGATCGGTCA GGGCGAAATG
TTTGCCGGTG TCGTCGATCT GATCCGTATG AAGGGTATTA TTTACGATAA AGAAGATGGC
AGTACCTATG AAGAGGTTGC CATTCCTCAT GATCTCGAAA GTGAAGCGAA GCACTGGAGA
ATCAATATGC TTGAGGCTGT CTCTGAAGTT GATGAGACGC TTCTTGAAAA ATATCTCGAA
GGCGAAGATA TCACTGAAGA CGAAGTACGC AAAGTGCTTC GCCAGGCGAC TCTTGCGGGG
ACTATTATTC CTACGCTGTG CGGGTCATCA TTCAAGAATA AGGGTGTTCA GTTTATGCTC
GATACCGTTG TCGAGTGTCT GCCATCCCCG GTTGATGTTG GTAATGTGGC CGGTCATCAT
CCTGATACAG ACGAAGATAT TGTTCGCGAG CCTAAGGATG AAGCTCCGTT TGCCGGGCTT
GCTTTTAAGA TTGCAACCGA CCCGTTTGTC GGCAAGCTGA CATTTTTCAG GGTCTATTCC
GGTGTATTGA AGGCTGGAAG TTATATTCTG AACTCAACGA CAGGAAAGAA AGAGCGCATT
GGTCGTCTTC TTCAGATGCA TTCCAACAAG CGCGAGGATC TGACGGAGGT TCATGCAGGA
GATATCGCGG CTGCGGTTGG TATGAAAGAT GTGAAGACCG GTGATACCAT GTGCGACGAG
GCAAAGCCTA TTATTCTCGA GAAGATGGTT TTTCCCGAGC CGGTTATTCA GATTGCTATC
GAGCCTAAGA CTAAAGCTGA TTCCGATAAG CTCGGTATGT CGCTTGCCAA GCTTGCTGAG
GAGGATCCGA CCTTCCGAGT CAGCAGTGAT GAAGAGACCG GTCAGACACT CATTGCCGGT
ATGGGCGAAC TGCATCTCGA GGTTCTTGTC GACAGGCTGA AGAGAGAGTT TAAGGTTGAA
GCCAATGTCG GTCAGCCTCA GGTTGCTTAC CGCGAGACGA TCAAGAAGGC AGTCGATCAC
GAAGGTAAGT TTGTTCGTCA GTCAGGCGGT AAAGGTCAGT TCGGTCTCGT CAATCTCAAG
GTCGAGCCGC TCGAGCAGGG TAAAGGTTAT GAGTTTGTCG ATGCTATCAA AGGCGGCGTG
ATCCCCAAGG AGTACATCCC TGCTGTATCG AATGGTATTC AGGAGGCGAT GAAGGATGGT
GTTATAGCAG GATACCCGGT TCAGGATGTC AAGGTGACGC TCTACGACGG AAAATATCAC
GATGTTGACT CTTCCGAAAT GGCGTTTAAG ATTGCCGGCT CAATCGGTTT CAAGGGCGCT
GTGAGAAAGG CTGATCCTGT TCTTCTTGAG CCGCTCATGA AGGTTGAAGT TATTACGCCT
GAGGAGTACC TCGGTGACGT GATGGGTGAT CTTTCAAGCC GCAGGGGCCA TATTGAAGGT
ATGGGCGATC GTGCAGGCGC GCAGTTTGTG AAGGCAAAAG TTCCGCTTTC CGAGATGTTC
GGCTATTCGA CCGTTCTGCG ATCGATGACC CAGGGCCGTG CCAACTACAC GATGGAGTTT
GAGCAGTACC ATGAGGTTCC GAAAAATATT GCCGAGGCTC TTCAGGAGAA GAACAGCGCT
AAGAATGCTG ACTGA
|
|---|
| Protein sequence | MARQVGLDKV RNIGIMAHID AGKTTTTERI LYYTGRLHKM GEVHDGGATM DWMEQEKERG
ITITSAATTC FWEPRYGIYK GKNHRINIID TPGHVDFTVE VERSLRVLDG AVALFCAVGG
VEPQSETVWR QANKYNVPRV AYVNKMDRVG ADFFETVKSI KERLGANPVP VQIPIGQGEM
FAGVVDLIRM KGIIYDKEDG STYEEVAIPH DLESEAKHWR INMLEAVSEV DETLLEKYLE
GEDITEDEVR KVLRQATLAG TIIPTLCGSS FKNKGVQFML DTVVECLPSP VDVGNVAGHH
PDTDEDIVRE PKDEAPFAGL AFKIATDPFV GKLTFFRVYS GVLKAGSYIL NSTTGKKERI
GRLLQMHSNK REDLTEVHAG DIAAAVGMKD VKTGDTMCDE AKPIILEKMV FPEPVIQIAI
EPKTKADSDK LGMSLAKLAE EDPTFRVSSD EETGQTLIAG MGELHLEVLV DRLKREFKVE
ANVGQPQVAY RETIKKAVDH EGKFVRQSGG KGQFGLVNLK VEPLEQGKGY EFVDAIKGGV
IPKEYIPAVS NGIQEAMKDG VIAGYPVQDV KVTLYDGKYH DVDSSEMAFK IAGSIGFKGA
VRKADPVLLE PLMKVEVITP EEYLGDVMGD LSSRRGHIEG MGDRAGAQFV KAKVPLSEMF
GYSTVLRSMT QGRANYTMEF EQYHEVPKNI AEALQEKNSA KNAD
|
|---|
| |