| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2065 |
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| Symbol | rpsJ |
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| ID | 6459181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2248671 |
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| End bp | 2248982 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726049 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002016722 |
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| Protein GI | 194334862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000262077 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.381336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGTTC AGCAAAAGAT CAGAATAAAG CTCAAATCCT ACGACCATAG TCTGGTGGAC
AAGTGGGCCG TCAAGATTAT CGATGTCGTC AAGCAGACGG ATGCAATTAT TTTCGGGCCA
ATCCCACTGC CGACAAAGAG TCATGTGTAT ACTGTTAACC GGTCTCCGCA TGTTGATAAA
AAATCAAGAG AGCAGTTTTC CTTCTCATCG CACAAGCGAT TGATCGAGAT TATGAATCCG
ACTGGAAAGA CCATCGATAT GCTGATGAAG CTTGAGCTTC CGAGTGGTGT TGATGTAGAA
ATTAAGTCTT AA
|
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| Protein sequence | MAVQQKIRIK LKSYDHSLVD KWAVKIIDVV KQTDAIIFGP IPLPTKSHVY TVNRSPHVDK
KSREQFSFSS HKRLIEIMNP TGKTIDMLMK LELPSGVDVE IKS
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