| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2063 |
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| Symbol | rplD |
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| ID | 6460260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2247372 |
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| End bp | 2247998 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726047 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_002016720 |
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| Protein GI | 194334860 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000340203 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.385687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTA AAGTTATCAA TACCGCCGGT GCAGAAACTG GTGAAGTGAT TTCACTTGAT
GATAAGGTTT TTGCCGCGAA GGTATCCGAG CACGCAGTCT ACCTTGATGT CAAGTCTCTC
CTGGCCAATA AACGTCAGGG GACACATAAA GTAAAAAATC GCTCTGAAGT AAGAGGCGGC
GGAAAAAAGC CATACAGGCA GAAAGGTACA GGCCACGCCA GACAGGGTTC AAGCAGGTCC
GGGCTTATGA GTGGAGGTGG TTCGATATTC GGCCCTCAGC CACATGGATA TGACCTCAAG
GTCAACAGAA AAATCAAACG CCTTGCACGC CGCTCAGCGC TCAGCTCCAA GGCAGGTGAA
GGCCGCATTA TCGTTATCGA GGATTTTACC TTCGAACAGA TCAAAACCAG ACAGTTCGCC
GATATCCTTA AAAACCTCGG TCTTGACCAG AAAAAAACGC TCGTTCTTCT TCCTGAGCAC
AATGAGATCA TTAACAGATC GGGCAGAAAT ATTCCTGTGC TCAATATCAG GGTGGCTGAC
CAGGCGTCGA CCTACGATAT CCTGGATTGT CAGACAGTCG TCATGCAGAA GGCTGCGGTG
AAGAAGATTG AAGAAACACT GGCTTAA
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| Protein sequence | MELKVINTAG AETGEVISLD DKVFAAKVSE HAVYLDVKSL LANKRQGTHK VKNRSEVRGG
GKKPYRQKGT GHARQGSSRS GLMSGGGSIF GPQPHGYDLK VNRKIKRLAR RSALSSKAGE
GRIIVIEDFT FEQIKTRQFA DILKNLGLDQ KKTLVLLPEH NEIINRSGRN IPVLNIRVAD
QASTYDILDC QTVVMQKAAV KKIEETLA
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