| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2046 |
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| Symbol | rpmD |
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| ID | 6460050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2239713 |
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| End bp | 2239901 |
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| Gene Length | 189 bp |
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| Protein Length | 62 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642726029 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_002016703 |
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| Protein GI | 194334843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00780916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.406407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA AAAATATCAG AATCACCCAG GTCCGCAGTA TCATCGGCTG CACAAAGAAG
CAGAAAGCGA CGATCAAATC GCTTGGCCTG GGCAGACCTA ACTATCAGGT CGAAAAGCCC
GACAACCCCT GCACCAGAGG TCAGGTCAAG GTTGTTCAGC ATATCGTTAA AGTTGAAGAG
CTCTCATAG
|
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| Protein sequence | MSDKNIRITQ VRSIIGCTKK QKATIKSLGL GRPNYQVEKP DNPCTRGQVK VVQHIVKVEE
LS
|
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| |