| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2037 |
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| Symbol | |
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| ID | 6459696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 2233993 |
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| End bp | 2234979 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642726020 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_002016694 |
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| Protein GI | 194334834 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000319536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.322219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATATACC AGATGCAGAT GCCTGAGCGA ATCGAGGTGG ATGAGGCAAC ACATAGTGAG
AGTATAGGAC AGTTTGTGGC TCAGCCTCTG GAAAGAGGAT ATGGTGTAAC CTTAGGTAAT
GCAATGCGCC GGGTATTGCT GGCATCTCTG CCGGGTACGG CTATTACCGG TATAAAAATA
GATGGTGTTT TTCATGAGTT TTCGACAATT GACGGCGTTC GTGAAGATGT TCCGGAAATT
GTCCTTAACC TGAAAAAGGT GCGTTTTAAA TCGACGACGA AGCGAAGCTG TAAAACCAGT
CTATCCATCG AAGGGCCTGC TGATTTTAAA GCCGGAGATA TCGTCGCTCA GGAAGGTGAG
TTTGAAGTCC TCAACAAGGA CATGCATATT GCAACCCTTA ATGGTGATGC AAAACTCAAT
ATAGATATTT ATATCGGACG AGGCAGAGGC TATGTTCCTG CTGAAGAAAA TCGGGGCGAA
GGTATGCCGA TCGGCTTTAT CGCTATCGAT TCGATTTTTA CACCGATCAA GAATGTCAAG
TTCTCTGTAG AAAATACCCG TGTCGGTCAG AGAACAGACT ATGAGAAAAT GATTCTCGAC
GTTGAAACCG ATGGTTCGAT TTCCCCTGAT GATTCAATCA GTCTTGCAGG AAAGGTCATC
AACGAGCATG TTTCTCTTTT CGCCAATTTT TCTCCTACAG AGGAAGAGTT CGCCGAAGAA
GAGTACAAGC AGCAGGATGA CGAGTTTGAA AATATGCGAA AACTCCTTCA GACCAGAATT
GAGGATCTTG ATCTTTCGGT CCGATCACAT AACTGTCTGA GACTTGCTGA AATAGATACT
CTGGGTGACC TGGTTTCCCG TAAAGAGGAC GAACTGTTGA CATACAAGAA CTTCGGGAAA
AAGTCGTTGA CAGAGCTTAA AGAGCAGTTA GACAAATGTG AATTGAAATT TGGTATGGAT
ATTACCAAGT ATCAGATGAA GAGCTAA
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| Protein sequence | MIYQMQMPER IEVDEATHSE SIGQFVAQPL ERGYGVTLGN AMRRVLLASL PGTAITGIKI
DGVFHEFSTI DGVREDVPEI VLNLKKVRFK STTKRSCKTS LSIEGPADFK AGDIVAQEGE
FEVLNKDMHI ATLNGDAKLN IDIYIGRGRG YVPAEENRGE GMPIGFIAID SIFTPIKNVK
FSVENTRVGQ RTDYEKMILD VETDGSISPD DSISLAGKVI NEHVSLFANF SPTEEEFAEE
EYKQQDDEFE NMRKLLQTRI EDLDLSVRSH NCLRLAEIDT LGDLVSRKED ELLTYKNFGK
KSLTELKEQL DKCELKFGMD ITKYQMKS
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