Gene Paes_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2027 
SymbolchlL 
ID6459369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2223587 
End bp2224414 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content53% 
IMG OID642726010 
Productprotochlorophyllide reductase iron-sulfur ATP-binding protein 
Protein accessionYP_002016684 
Protein GI194334824 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0592137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAA TCCTGGCTGT ATATGGTAAG GGTGGTATCG GTAAAAGCAC GACGACCGCC 
AATATTTCCG CGGCTCTCGC TCTTCAGGGT GCCAAAGTGC TTCAGATCGG TTGTGACCCG
AAACATGACA GTACTTTTCC GTTGACCGGA ACGCTTCAGA AAACTGTTAT CGAGGCTCTC
GACGAGGTCG ATTTTCATCA CGAAGAACTC GAAAAAGAGG ATATCATCGA GACCGGTTTT
GCCGGCATCG ATGCGCTTGA GGCAGGCGGT CCGCCGGCCG GCAGCGGCTG TGGCGGCTAT
GTCGTCGGCG AAGCGGTCAA ACTGCTCCAG GAACTCGGTC TGTATGACCA GTACGACGTT
ATTCTTTTTG ACGTGCTTGG CGATGTCGTC TGCGGCGGCT TCAGCGCTCC ACTCAACTAT
GCCGACTACG CCGTCATTAT CGCCACCAAC GATTTCGACA GCATCTTTGC AGCAAACCGC
CTCTGCATGG CTATCCAGCA GAAGAGCGTT CGCTATAAGG TCAAGCTCGC AGGTATTGTC
GCAAACCGTG TTGACTACGT CAAAGGCGGC GGTACCAACA TGCTCGAACA GTTTTCCGAA
AAAGTCGGCA CCAAACTGCT CGCCCGTGTG CCGTATCACG AGCTGATCCG CAAGAGCCGT
TTTGCCGGTA AAACCATGTT CCAGATGGAA GATGGCCCTG AAAAGGATGA ATGCCTGAAA
CCCTACAATG AAATTGCCGA ATTTCTCCTT TCAGAGAATC CGTCAGCGTC GGTACCGGTA
CCGATCGGTG ACCGCGACAT CTTCGAGATT GTCGGCGGAT GGCAGTAG
 
Protein sequence
MSLILAVYGK GGIGKSTTTA NISAALALQG AKVLQIGCDP KHDSTFPLTG TLQKTVIEAL 
DEVDFHHEEL EKEDIIETGF AGIDALEAGG PPAGSGCGGY VVGEAVKLLQ ELGLYDQYDV
ILFDVLGDVV CGGFSAPLNY ADYAVIIATN DFDSIFAANR LCMAIQQKSV RYKVKLAGIV
ANRVDYVKGG GTNMLEQFSE KVGTKLLARV PYHELIRKSR FAGKTMFQME DGPEKDECLK
PYNEIAEFLL SENPSASVPV PIGDRDIFEI VGGWQ