Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2017 |
Symbol | |
ID | 6459814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2213229 |
End bp | 2215871 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642726000 |
Product | hypothetical protein |
Protein accession | YP_002016674 |
Protein GI | 194334814 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000248245 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.284056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCATC GTGATGTAAA CAGACTTTTT GCAGCGTTAC TGTTTCTGCT TTCAGGGGCG GTCTATCTTA TGACCATGGC GCCAACGCTG TCATTCTGGG ATTGTGGTGA ATTTATCGCT ACCGCACGTA CTCTCGGGGT GCCTCATCCG CCGGGCGCGC CGCTTTTTCT GTTGGCCGGA CGGGTGATCT CGATGATACC ATTTTTCGGC GATATCGGAG CGCGGGTCAA CCTCCTGAGC GTTCTGTCGA GTGCCGCAAC GGTCATGATG GCATATCTTG TGACCGTTCG TTTCATTATT CTCTATCGAA AAACAGATCC GGACAGCTGG AATCCGGTTG AGAAGCTGTC GGCATACGGC GGCGCTGCTG TCGGGGCTCT TGTGCTTGCG TTTTCCGACA GCTTCTGGTT TAATGCTGTC GAGACCGAGG TCTACGCCGC TTCAACCTTT TTTACCGCTT TGGTGGTCTG GCTTCTCCTT CGCTGGTATG AGGAGGAGCC TCAGAGCGGC AACGAGCGAT GGCTGCTTGT TGCTATGTAC GTGATCGGTC TGTCTATCGG GGTGCACCTT CTCAGCCTGC TTGCGGTTTT TGCCGTAGCT ATGGTTTACT ATTACAGGAA ATATGATGTG ACGCCGAAAT CGTTTATCAT TATGATGATC GCTGCATCGG CGCTGTTTCT GCTCATCTAT GTCGGAGTGA TCAAGGGATT GCCGTTTCTG CTTGAGCGTT TTTCCTGGTG GGGGGGGATC ATGATGCTTG CCGCTATGAT CTACGCGATC ACTTACGCGC ATCGCAAACG TCATGTGCTT ATGCATACCG TAAGCATGTC CCTCCTGTTG CTGGTTATCG GGTATACCTC CTATGCCATG ATCTACGTTC GAGCCAAGGC CGGACCGCCG ATCAACGAGA ACAATCCATC AACCGCGGAG GCCTTTTTCT CCTATCTGAA CCGTGAGCAG TACGGAGATC TGCCGCTCTG GCCAAGGCGG TGGTCGAGTG AGCCGCTGCA TCAGTATTTC TACAGGCAGT ACAGCAGCGA TGCGGACTAT TTCCTGCGAT ATCAGCTTGG CCAGATGTAT ATGCGGTATT TCGGCTGGCA GTTCATCGGT CGGGCCCATG CCGGAACCGG TGCACCGGTT GACTGGTCAC AGCTCTGGGG GCTGCCGTTT CTTCTTGGTA TCGGAGGGGC GGTCGTCCAG ATGCGACGGG ATTGGAAAAT GGGATCGGTA GTCCTTGCCC TGTTTGTGCT GACCGGTGCG GCGCTGGTCG TCTACCTCAA CCAGACCGAG CCTCAACCCC GTGAACGGGA CTACAGTTAC GTCGGCAGTT TCTTTGCGTT CGCTCTCTGG ATCGGTATCG GCGCAGAGCG TCTTTTGATG GAAGTCCGTC GGTTTTTCTC ATCAGACGCC GTTCAGCAGA AAGCCGCGAT GTTCCTGCTT GCTATGGTCG TTCTTCTGGT TGACGGGCGG ATGTTGATGG CCAACTATTT CACCCATGAC CGTTCAGGAA ACTATGTGCC GTGGGATTGG GCCTGGAACA TGCTTCAGAG CTGTGATCAT GACGCGATCA TGTTTACCAA CGGTGATAAC GACACCTTTC CGCTCTGGTA TCTTCAGGAG GTTGAGGGGA TACGTACCGA TGTGCGTGTC GTCAATCTCA GCCTCGCCAA TACAGGCTGG TATCTCGATC AACTGAAGAA CACTTCTCCG AGAGGAGCCA GACCAATCCG TTTTGGTCTC GACGATAGTG AGCTTCGACA GATCAGCTAT GTCGCCATTG ATCCGGTCGA GGTTCAGCTC AAGACCGGTG CAGAAAAGGT TCGTCTGACT GAAGAGTATA AAGCGGCTGG TATTGCTCCT CCCGCCGCAC CGCAGGATAG TCTGCAGTGG GTTATTACCC CTACGGTGAA TTTCAGGGGG CAGGGGTTCA TTCGTCCTCA GGATGTTGCC GTCTATGAGA TTGTGATGAA TAACTTCGGC TCGCGTCCCA TCTACTTTGC GTTGACTGTC GGTCGCGACA ATCTTCTCGG TCTTGAAGGG TTTCTTCAGC TTGAGGGCCT GGCTTATCGT CTTGTGCCGA TGCATGCGCC AGAGGGGAGC CCCCTGGTCA GTCTTCCCCG GCTCTATACG ACGCTTTGTG AGACCTTCCG TTACCGCAAC CTCAATAATG CGGAGGTGTT TATCGATGAA ACCGCCGCAC GGCTCAGCAG TAACTACAAG CCGCTCTTCA GCCGTCTTGC CCTCGGCCTT GCCGAGGCTC CTGATGATGA GATATCGGTA CGCACTGCCG AAGGAGAACG GCGCACAATA CAGAGAAAAG AGCTTGCGCT CAGCGTCCTT GAGCAGTCCG GAGAGCGGCT GCCGCTCGAG CGCTATGGTC TCGATCCCGA ATTTGCTGCT TCAGAGGTCT ATCTTTATGT CTCTCTGGGT GAAAAGCAGA AGGCATATCC TTATATTTCC TATCTTAAAA AACTTGCTGC AACAACAACC ATGCAGGCTG ATCCCGCTCT TTACTACGCG CTTGCACTGT CGTTGCGTGA GGTCGGCCAG CTCGATGCAT CACAAAAGAT ACTTGAGCAA CTGCTCAGGG ATGGTGATAC GCTGCAGGCG GGTCAGGAGA GATACCAGAA CGAAGAAAAG TAA
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Protein sequence | MKHRDVNRLF AALLFLLSGA VYLMTMAPTL SFWDCGEFIA TARTLGVPHP PGAPLFLLAG RVISMIPFFG DIGARVNLLS VLSSAATVMM AYLVTVRFII LYRKTDPDSW NPVEKLSAYG GAAVGALVLA FSDSFWFNAV ETEVYAASTF FTALVVWLLL RWYEEEPQSG NERWLLVAMY VIGLSIGVHL LSLLAVFAVA MVYYYRKYDV TPKSFIIMMI AASALFLLIY VGVIKGLPFL LERFSWWGGI MMLAAMIYAI TYAHRKRHVL MHTVSMSLLL LVIGYTSYAM IYVRAKAGPP INENNPSTAE AFFSYLNREQ YGDLPLWPRR WSSEPLHQYF YRQYSSDADY FLRYQLGQMY MRYFGWQFIG RAHAGTGAPV DWSQLWGLPF LLGIGGAVVQ MRRDWKMGSV VLALFVLTGA ALVVYLNQTE PQPRERDYSY VGSFFAFALW IGIGAERLLM EVRRFFSSDA VQQKAAMFLL AMVVLLVDGR MLMANYFTHD RSGNYVPWDW AWNMLQSCDH DAIMFTNGDN DTFPLWYLQE VEGIRTDVRV VNLSLANTGW YLDQLKNTSP RGARPIRFGL DDSELRQISY VAIDPVEVQL KTGAEKVRLT EEYKAAGIAP PAAPQDSLQW VITPTVNFRG QGFIRPQDVA VYEIVMNNFG SRPIYFALTV GRDNLLGLEG FLQLEGLAYR LVPMHAPEGS PLVSLPRLYT TLCETFRYRN LNNAEVFIDE TAARLSSNYK PLFSRLALGL AEAPDDEISV RTAEGERRTI QRKELALSVL EQSGERLPLE RYGLDPEFAA SEVYLYVSLG EKQKAYPYIS YLKKLAATTT MQADPALYYA LALSLREVGQ LDASQKILEQ LLRDGDTLQA GQERYQNEEK
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