Gene Paes_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2010 
Symbol 
ID6459829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2207146 
End bp2208099 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID642725993 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002016667 
Protein GI194334807 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0195163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.359337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA GTCCGCTCCT GACGGGCCGC CGATCAGGTG CTGTTTGCAC GATGACGGCA 
GTTTTTGCTT GTCTCATGTT TTTTTGTTTC CCTGTGCCGT CGATAGCCGA GCCCCACGCA
AAGGATTCTC TTAAGGTGGA GCCTCTCGAT ATCGCATCAT ATATTCTCAA GGATATAGGC
CGTTCAACGG TGCTGCTTGA AAAAGACCCC GGGACACGTC ATGAACCGGC AAGTCTCACG
AAGATACTTA CCTGCATTAT TGCTATTGAG AGCGCCAGGC TCAATGAGTT TGTGACGATT
CCTCTTGAAG CGACACAGGT CGAACCGACC AAGGCCGGTT TTCTGCCGGG CGAAAAAATA
CGACTTCTTG ATCTGGTTAA AGCCGCAATG GTCAAATCGA GCAATGATGC AGCTTTTGCC
ATCGCAATAC ACCTTGGCGG AAGTGTTCAG GGGTTTGCGG CCATGATGAA CGCCAAAGCC
GCTGAGCTTG GGCTTTCCCA TTCCTGTTTT ACCAATCCGG CCGGTTTCGA TCGCCATCAG
TACGTTGGCC ATTATTCAAC TGCTGGAGAT ATGCTGCGTT TGACCGAGTA TGCGATCGGC
AATCAGATTT TCAACTATAT AGCAGGTCTC GACGAGGTCT CGATCACTGA AAAACGTTCC
GGCAAAATCT ACAGGCTCAA GACGAGCAAT AAATTGCTTC ATCGGTATCC TTATGCTGTC
GGAATCAAAA CCGGTTATAC CTTCAGGGCA GGCAAGTGTC TTATTGCAAG GGCAAAAAAA
GGTGACCGTG ATGTCGTACT GGTGATGCTC AATGCGCGTC TTGATCGTTG GTCGGTGGCA
GAAGAACTTT TCGAGAAGGC CTTTTCGCTT CCGGGTTCTG AGCGGGCTCC GTTCGGGCAG
CGCAGTCACG ATATGCGAGC ATCACTTATT CTGAAGGGCA ATGAGCTGCA GTAG
 
Protein sequence
MMKSPLLTGR RSGAVCTMTA VFACLMFFCF PVPSIAEPHA KDSLKVEPLD IASYILKDIG 
RSTVLLEKDP GTRHEPASLT KILTCIIAIE SARLNEFVTI PLEATQVEPT KAGFLPGEKI
RLLDLVKAAM VKSSNDAAFA IAIHLGGSVQ GFAAMMNAKA AELGLSHSCF TNPAGFDRHQ
YVGHYSTAGD MLRLTEYAIG NQIFNYIAGL DEVSITEKRS GKIYRLKTSN KLLHRYPYAV
GIKTGYTFRA GKCLIARAKK GDRDVVLVML NARLDRWSVA EELFEKAFSL PGSERAPFGQ
RSHDMRASLI LKGNELQ