Gene Paes_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1975 
Symbol 
ID6459915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2166857 
End bp2167558 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content50% 
IMG OID642725960 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_002016634 
Protein GI194334774 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.611678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTT CATCATCATT CAACGCTAAA GAACATCAGA AAATGCTCCG TTCCTATTTC 
AACGGGAACG GTTTCAGCCG CTGGGCATCG ATTTACGGAA ACGACAAACT CTCAACAGTC
CGTTCTACCG TCCGTCAGGG ACATGCCGTC ATGATGGACG AGGCGTTTGC ATGGATCGAG
AAGCTCAATC TGCCAAAAGG GGCAACAATC CTCGACGCCG GCTGCGGAAC AGGACTCTTC
AGCATCCGCC TGGCTGAAAA CGGCTATCGG GTCAAAGCTG TCGATATCGC CTCTCAGATG
GTCGGCAAGG CCAAAGAGGA CGCAACAGCA AAAGGTGTCG CCAACATGAT CGATTTCGAG
GTCAACACCA TTGAAGAAGT CAAAGGCCAG TACGACGCAG TCGTCTGTTT CGATGTCCTC
ATTCACTACC CTGCCGAAGG ATTCGTCAAC GCATTTCAGA ATCTTTCCAG TCTGACAAAA
AGCCCGATCA TCTTCACCTA TGCCCCGTAT AACAGAATTC TGGCATTTCA GCACTGGCTC
GGAGGCTACT TCCCGAAAAA AGAGCGTCGG ACAACCATTC AGATGATACG TGACGAACAA
ATGCAGGAGG CAATGCAGTC CACGAAGATG GCTGTTAAAA CCAAAAAGAA AATAAGCTTC
GGCTTCTACC ATACCATGCT CATGCACGCT GAGCGCAGGT AA
 
Protein sequence
MSSSSSFNAK EHQKMLRSYF NGNGFSRWAS IYGNDKLSTV RSTVRQGHAV MMDEAFAWIE 
KLNLPKGATI LDAGCGTGLF SIRLAENGYR VKAVDIASQM VGKAKEDATA KGVANMIDFE
VNTIEEVKGQ YDAVVCFDVL IHYPAEGFVN AFQNLSSLTK SPIIFTYAPY NRILAFQHWL
GGYFPKKERR TTIQMIRDEQ MQEAMQSTKM AVKTKKKISF GFYHTMLMHA ERR