Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1950 |
Symbol | |
ID | 6459982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2131469 |
End bp | 2132512 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642725935 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_002016609 |
Protein GI | 194334749 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCG GGTCATTGGA CATCGGTCAG GCGATTATGC TCGCGCCTAT GGAAGAGGTG ACTGATCGTT CTTTCAGGAA AATCTGTAAG CGGTTCGGGG CAGATGTTGT CTATACTGAA TTTATCAGTG CCGAAGCGAT CCGTCGACAG GTCGATACGT CGCTCCGTAA AATGCGGTTT GACGATGATG AGGCTCCTGT TGTCGTTCAG ATTTTCGGCA ACAGCCAGGA AGCTATGGCT GAGGCTGCTG TCATTGCGGC ATCGTGCAGC CCGGCATGGA TCGATATCAA TTTTGGTTGT CCCGCAAAAA AAGTTGCCGG GAAAGGGGCC GGTGCTGCCC TGCTGAAAGA ACCCGATAAA ATGGTCGCGA TTGCCGCTGC GGTTGTCCGT GCGGTCAATC TGCCTGTTAC GGTCAAAACG CGTCTTGGCT GGGATCGCGA TTCAATCAAT ATTGTCGATA TCGTGCCCCG TCTGGAGGAT GTCGGGGTTC AGGCTCTGGC GATTCACGGG CGGACGCGCA GCGAGATGTA CAGGGGCGTG GCCGATTGGG AGTGGATCCG AAAGGTGACG GAGAAGGCCA GAATACCGGT TATCGCCAAT GGCGATATAT GGAGTGCAGC GGATGCCAGG GCGATGTTTG CCGAGACCGG GGCTGATGCT GTCATGATAG GACGAGGAGC GATTGGTAAT CCTTTTATCT TCGCTCAGGC CAGGGAGCTT CTCGATACGG GGCGCGTGGT GACGCATCCT GATTACAGGG ATCGCATTGC CGTTGCGGTC GAACATCTGA AACTGTCGGT TGAATTCAAG GGGGAGAAGT ACGGAAGCCT TGAAATGCGG AGGCATTACT CAACCTATCT GAAAGGACTT CCGCGGGTTT CCAGGGTTCG CGACAAGCTG GTTCGCGAAC CGGACTGGAG AAACGTCATC GAAATCCTTC AGGCTTACGA GGTCGAATGC GAAGGCTATG AACGCGAAGG AAAGATCCGC GATTATGCGG AATTTCTCAA TGACCATTCG AAGCGATTGA CATTAAACTA TTAG
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Protein sequence | MKVGSLDIGQ AIMLAPMEEV TDRSFRKICK RFGADVVYTE FISAEAIRRQ VDTSLRKMRF DDDEAPVVVQ IFGNSQEAMA EAAVIAASCS PAWIDINFGC PAKKVAGKGA GAALLKEPDK MVAIAAAVVR AVNLPVTVKT RLGWDRDSIN IVDIVPRLED VGVQALAIHG RTRSEMYRGV ADWEWIRKVT EKARIPVIAN GDIWSAADAR AMFAETGADA VMIGRGAIGN PFIFAQAREL LDTGRVVTHP DYRDRIAVAV EHLKLSVEFK GEKYGSLEMR RHYSTYLKGL PRVSRVRDKL VREPDWRNVI EILQAYEVEC EGYEREGKIR DYAEFLNDHS KRLTLNY
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