| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1925 |
|---|
| Symbol | |
|---|
| ID | 6460035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 2107475 |
|---|
| End bp | 2108719 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642725910 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_002016584 |
|---|
| Protein GI | 194334724 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.984732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCT TAAAGAAACC GGAACTGATC GCTCCTGCCG GAGACAGAAC CTCGCTCATA
ACTGCTCTGA ATGCAGGAGC TGACGCAATC TATTTTGGCG CAGAAAGCTG CAACATGCGC
GCCAGAAGCC GCAGTTTCAA CAGCCGGGAT TTCCATGATA TCGCATCACT CTGCCAGGAA
CATCAGGCCA GGTCCTATCT TGCGCTCAAC ACTCTCGTCT TCGATAACGA AATTGAGATG
GTCAACATGA CGGTCGCAGC AGCAAAAAAG GCCGGCATCG ATGCCGTCAT CTGCTGGGAT
GTGGCCGCTA TCAATGCCTG CAGAACTCAG AATATGCCGT TCCATCTCTC CACCCAGGCA
TCGGTCAGCA ACTACAGCGC AGTCTCGTTC TATGCCTCTC TCGGTGCAAA GATGATTGTG
CTTGCCCGCG AACTGACGAT TGAACAGGTA AACTCCATCA CCGAACAAAT TCGAAAGGAC
AAGCTCGATG TCGCTATCGA ATGCTTCGTT CACGGTGCAA TGTGCGTCGC TGTTTCAGGC
AGATGTTTTC TTTCGCAGGA TATTTTCGGT CGTTCCGCCA ACAGGGGCGC ATGCCTGCAG
CCCTGCCGCC GCCGTTACCG GATTATCGAT GAAGAAGAGG GCTTTGAGCT GGAAATCGGA
ACCGATACGG TAATGAGCCC CAAAGACCTC TGTGCGATCT CCTTGATGCC TCTGCTTATC
GACTCTGGAA TTACCGGTTT CAAGATAGAA GGACGCAACC GCAGTCCTGA ATATGTCCAT
ACCACGACAT CCTGCTACCG CCAGGCCATC GACTACATTG TAGCACACCG CCATGAAACA
TCATTCGAAG AAGATTATCA AGCAGTTGCC GACAATCTTA CCAGGCAGCT GAAAACAGTC
TACAACCGTG AGTTTTCGAG CGGATTTTAT TTCGGCAAGC CCTTCGATGC CTGGACAAGG
AACTACGGTT CGAGAGCGAC CGAAAAAAAG GTCTATCTCG GCACCGTTCT CAAGTACTAC
CCTCAAGCAG AAATCGCTGA AATCCTCATC CACTCGGAAG AACTGAAGCG GCATGACAAA
CTCTCGATAC AGGGCACGAC AACAGGGATT GTCATCCTCA ACGCTGAATC ATTTCACGCA
TCCGATAAAC CCGCAGATTC CGCCGAGAAA GGCGAAGTAG TCACCCTGCC CTGCAACCGA
AAAGTCAGAA AAAACGACAA AGTATATCTG CTTCGACCAA TCTGA
|
|---|
| Protein sequence | MHTLKKPELI APAGDRTSLI TALNAGADAI YFGAESCNMR ARSRSFNSRD FHDIASLCQE
HQARSYLALN TLVFDNEIEM VNMTVAAAKK AGIDAVICWD VAAINACRTQ NMPFHLSTQA
SVSNYSAVSF YASLGAKMIV LARELTIEQV NSITEQIRKD KLDVAIECFV HGAMCVAVSG
RCFLSQDIFG RSANRGACLQ PCRRRYRIID EEEGFELEIG TDTVMSPKDL CAISLMPLLI
DSGITGFKIE GRNRSPEYVH TTTSCYRQAI DYIVAHRHET SFEEDYQAVA DNLTRQLKTV
YNREFSSGFY FGKPFDAWTR NYGSRATEKK VYLGTVLKYY PQAEIAEILI HSEELKRHDK
LSIQGTTTGI VILNAESFHA SDKPADSAEK GEVVTLPCNR KVRKNDKVYL LRPI
|
|---|
| |