Gene Paes_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1900 
Symbol 
ID6460089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2077782 
End bp2078462 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID642725885 
Producthypothetical protein 
Protein accessionYP_002016559 
Protein GI194334699 
COG category[S] Function unknown 
COG ID[COG5473] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.873498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG GAGCACAACC GTTTGATTTT GGAAGGAAGG TCGATACGCA TCTTTTTGAC 
AGGGTGATAG ACGAAGGCTA TGAGGTCAAT ATGAGTGACT ATATCAGTGA ATCATGGGAC
TTTTTCAAGG TACATGCCGC TGAGTTTTCA GGATTTACCC TGATTCTTTT TCTCTTAACC
GCAGTTCTTT CAAAGCTTGA TATCTTCGGT TCGATTGCTT TGACTGCTGT CATGAGTCCT
CTCTACGCGG GATATGTGAT CGTGACCCTG AAAAAGATTC AGGGTGAAGC GTTCAGGTTC
AGCGACTTTT TTCAGGGCTT CAACTCCTTT CTTCCTCTGG TTCTTGCCGG TTTTCTGACA
GGGATTCTTG TGACTATCGG CATGGTGCTG TTTCTTTTGC CCGGCATTTA CCTTGCCGTT
GGATACATGT TTACGACCGC GTTTATCGTT GACTACCGGA TGGATTTCTG GCAGGCGATG
GAGACCAGCC GCAGGATCGT GACAAAAAAC TGGTTTTCAC TCTTTGTTTT CGGCCTGCTG
CTTGCGCTCA TCAACCTTCT TGGAGTTCTG GCATTTGGTA TCGGGCTGCT GGTGACCATT
CCGGTGAGCG CATGTGCCGT CGTGTTGGCA TATCGTGATA TTGCCGGTGT TCATGGAGGG
GAGTGGAGAC GCCCTCTTTG A
 
Protein sequence
MEPGAQPFDF GRKVDTHLFD RVIDEGYEVN MSDYISESWD FFKVHAAEFS GFTLILFLLT 
AVLSKLDIFG SIALTAVMSP LYAGYVIVTL KKIQGEAFRF SDFFQGFNSF LPLVLAGFLT
GILVTIGMVL FLLPGIYLAV GYMFTTAFIV DYRMDFWQAM ETSRRIVTKN WFSLFVFGLL
LALINLLGVL AFGIGLLVTI PVSACAVVLA YRDIAGVHGG EWRRPL