| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1894 |
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| Symbol | metH |
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| ID | 6460099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 2068912 |
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| End bp | 2072601 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642725879 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002016553 |
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| Protein GI | 194334693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAAA CTCCACAAAG CCTGCTTGAA AAAAAAATTC TTGTGCTCGA TGGTGCCATG
GGTACCATGA TTCAGCGCCA CAAGCTTGAA GAAAAAGATT TTCGATCGGA ACGGTTCGCA
TCACACTCTC ATCCGCTGAA GGGCAATAAT GATATTCTCG TGCTGACCCA GCCGGAAATC
ATCTACGACA TCCATTGCGA CTTTCTCGAA GCCGGAGCCG ACATCATTGA AACCAATACC
TTCAATGCCA ATCCGGTATC ACAGGCGGAC TACGGAACCG AGGACCTTAT CAAAGAGCTC
AACCTGTCAG CAGCCTCCAT TGCGCGAAGA GCTGCCGACG CCTACACGGC AAAAAACCCG
TCTAAACCGC GTTATGTTGC CGGCTCCATG GGCCCGACCA ACAAAACACT CTCACTCTCA
CCTGATGTCA ACAACCCCGG CTACAGAGCA GTAACCTTCC AGGATGTTGT CGACAACTAT
ATCCTGCAGC TGGACGGACT TGTTGAGGGA GGCGTTGATC TGTTGCTCGT CGAAACCGTG
TTCGATACCC TTAACTGCAA GGCTGCTCTT TACGCTATAG AAGAACACAG CAGAAAAACC
GGAAAAAACC TGCCCATAAT GATTTCCGGT ACCGTCGTCG ATGCCAGCGG ACGAACCCTG
TCCGGCCAGA CAACCGAAGC GTTCTGGATA TCGGTCGCTC ACACGCCAAA CCTGTTGAGC
GTAGGCCTGA ACTGCGCCCT GGGCTCGAAA CAGATGCGGC CATTCGTAGA AGCACTCTCC
GGCATCGCCG AGAGCTATGT CAGTGTCTAT CCCAACGCCG GCCTGCCGAA CGAATTCGGA
GAATATGACG ACAGCCCTGA ATACATGGCA TCACAGATAG CCGACTTTGC CCGCTCCGGT
TTTGTCAATA TTGTCGGTGG ATGCTGCGGA ACGACCCCGG ACCACATCAG AGCCATTGCC
AGAGATGTCG CAGCCATAGA ACCTCGCAGG AAGCCCAAAG CATCGCATGA ACTCCAGCTT
TCAGGCCTTG AACCGCTCCT TGTCAACAAA ACCACAGGCT TCATCAATAT CGGGGAACGC
ACCAACGTCA CCGGATCGAG AAAGTTTGCC CGCCTGATCA AAGAAGAAAA CTACGATGAG
GCGCTTTCGG TTGCCAGAGA ACAGGTTGAA AACGGGGCTC AGGTTATCGA CATCAACGTT
GACGAAGGAA TGCTCGATTC CGAAAAGGTG ATGCATGAAT TCATCAACCT GATCGCTTCA
GAACCTGAAA TTTCCAAAGT GCCGCTCATG ATCGACTCAT CAAAATGGTC GGTCATTGAA
AGCGGTCTGC GCTGTTCACA AGGCAAATGT ATCGTCAACT CAATCAGTCT GAAAGAGGGC
GAAGAACTCT TCAAGCAACG AGCGAAGAAA ATCCTGCAGT ACGGCGCAGC GACTGTTGTG
ATGGCGTTCG ATGAAAAAGG ACAGGCCGAC AGCCTTGAAC GACGTATAGA AATCTGCAGC
CGGGCCTACA GCATTCTCTG TGAAGAGGTG GGGTTCCCCC CTGAGGATAT CATTTTCGAC
CCGAACGTTC TGACTGTCGC AACAGGTATT GAAGAGCATG ACAATTACGC GGTCGATTTC
ATCGAATCTG TCCGTTGGAT CAAGCAGAAC CTTCCCTTTG CAAAAATTTC CGGAGGAATC
AGCAATGTCT CATTCTCGTT CAGGGGCAAC AACCCGGTCC GGGAAGCTAT GCATGCTGCA
TTTCTGTACC ACGCGATCCA TGCTGGTCTG GATATGGGCA TCGTCAATGC AGGGCAGCTT
GCTATTTACC AGGATATCGA GCCGGAACTG CTTGAAAGGG TCGAGGATGT GCTGCTCAAC
CGCAGAAAGG ATGCAACCGA ACGCCTTGTG GATTACGCTG GATCAATGAT CAGCGAAGAC
ACGACGAAAA ACAGCCCGAA AAAGGCCGAG TGGCGCAACG AAAGCGTCGA AAAACGTCTT
GAGCATGCAC TTATCAAAGG TATCGTCGAT TTCATCAATG AAGATATTGA GGAGGCTCGT
CTGAAGTATG CAAGCCCGCT CAAAGTCATA GAAGGTCCGC TGATGCACGG CATGGATGTC
ATTGGGGACC TCTTTGCCGC AGGAAAAATG TTTTTGCCGC AGGTCGTCAA AAGTGCAAGG
GTCATGAAAA AAGGGGTCGC CTATCTGATC CCCTTCATCG AAGAGGAGAA AAGGAAGGGG
AACGATAGCT CCGCCGCGGC CAAAGTCCTG CTTGCAACCG TCAAAGGAGA TGTGCATGAT
ATCGGCAAGA ACATTGTTTC GGTCGTCCTG GCCTGCAATA ACTATGATGT TGTCGATATC
GGCGTCATGA TGCCTTGCGA AAAAATTCTC GATGCCGCTG AAAAAGAACA TGCCGATATC
ATCGGCCTGA GCGGCCTGAT CACCCCCTCT CTCGACGAGA TGGTCCATAT CGCTAAAGAG
ATGGAGCGCC GTGGCATGAC AATCCCGCTT CTGATCGGCG GCGCCACGAC CTCGAAAGTC
CATACCGCCG TTAAAATCGC GGAACACTAT TCGGGCCCTA TTGTCCATGT TCTTGATGCA
TCGCGAAGCG TTCCTGCCGT AAACAACCTT GTCACGCCAT CCCTGAAAAC CAACTATGTT
GAGAAGTTGC TGGCCGGCCA GGAAGAACTG CGCAGGAAAC ATAAGGAAAA AAATGCCGCT
AAAACCTATC TGAGCATCGC TGAGGCAAGA AAAAACCACG CAGAGCTCTC ATGGAACGAT
GCGCCACCTG CGCCACCACT CAAGCCGGGA ATCACCACGT TCGACAGGGT TTCTCTCGAC
GAACTGCGAG AGTATATCGA CTGGACTCCC TTCTTCAGGG TATGGGAAAT TCATGGCCTC
TGGCCTGCGA TCAAAAGCGA CCCCCACTAT GGAGAAGAAG CGACAAAGCT GTACGACGAT
GCAAACCGCC TGCTCGATAC CATGTGCGCT GATACCTCAT CACTGCAGGC TCGCGGCGTT
GCAGGGATCT TCCCTGCCAA CAGCAACGGG GATGATATCG AGGTCTACAC CGATGAGGAA
CGAACAACGC TGCGCTGCAC ACTGCACACC CTCCGCCAGC AGGCAGAACA GAAACAAGCC
TCACCGAACC TTGCGCTTGC GGATTTCATC GCCCCGAAAT CAAGCGGAAT CAAGGATTAC
ATCGGCTGTT TCACCCTGAC AACGGGCCAT GGCCTGCAGG AAATCATGGA CCGCTTTGCA
GAAGACCATG ACGATTACCA CAGGATAATG GCACAAGCCC TCGCTGACCG CCTTGCCGAA
GCGTTCGCCG AGATGCTGCA CAGAAAAGTT CGAATGGAAC TGTGGGGTTA TGCTCCTGAC
GAATCACTCG ATCATGATCA GCTGATCGGT GAAAAATATC GTGGTATACG ACCTGCTCCG
GGATATCCCG CATGTCCCGA TCATACTGAA AAACCGAAGA TTTTCGATCT GCTCAACAGC
GAAGCCGCCA CAGGAGTCAC CCTGACCGAA ACCTTCGCCA TGAATCCGCA GGCATCGGTT
TGCGGGCTTT ATTTCGCTCA TCCGGAGGCG AAATACTTTA TCCTCGGTCA GATAGGAAAA
GATCAGGTGG AAGAGTATGC CGAACGAAAA AAAATGACGA GGTCGGAGGT TGAAAAATGG
CTGGCGCCAA ACCTCAACTA CACGCCCTGA
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| Protein sequence | MRETPQSLLE KKILVLDGAM GTMIQRHKLE EKDFRSERFA SHSHPLKGNN DILVLTQPEI
IYDIHCDFLE AGADIIETNT FNANPVSQAD YGTEDLIKEL NLSAASIARR AADAYTAKNP
SKPRYVAGSM GPTNKTLSLS PDVNNPGYRA VTFQDVVDNY ILQLDGLVEG GVDLLLVETV
FDTLNCKAAL YAIEEHSRKT GKNLPIMISG TVVDASGRTL SGQTTEAFWI SVAHTPNLLS
VGLNCALGSK QMRPFVEALS GIAESYVSVY PNAGLPNEFG EYDDSPEYMA SQIADFARSG
FVNIVGGCCG TTPDHIRAIA RDVAAIEPRR KPKASHELQL SGLEPLLVNK TTGFINIGER
TNVTGSRKFA RLIKEENYDE ALSVAREQVE NGAQVIDINV DEGMLDSEKV MHEFINLIAS
EPEISKVPLM IDSSKWSVIE SGLRCSQGKC IVNSISLKEG EELFKQRAKK ILQYGAATVV
MAFDEKGQAD SLERRIEICS RAYSILCEEV GFPPEDIIFD PNVLTVATGI EEHDNYAVDF
IESVRWIKQN LPFAKISGGI SNVSFSFRGN NPVREAMHAA FLYHAIHAGL DMGIVNAGQL
AIYQDIEPEL LERVEDVLLN RRKDATERLV DYAGSMISED TTKNSPKKAE WRNESVEKRL
EHALIKGIVD FINEDIEEAR LKYASPLKVI EGPLMHGMDV IGDLFAAGKM FLPQVVKSAR
VMKKGVAYLI PFIEEEKRKG NDSSAAAKVL LATVKGDVHD IGKNIVSVVL ACNNYDVVDI
GVMMPCEKIL DAAEKEHADI IGLSGLITPS LDEMVHIAKE MERRGMTIPL LIGGATTSKV
HTAVKIAEHY SGPIVHVLDA SRSVPAVNNL VTPSLKTNYV EKLLAGQEEL RRKHKEKNAA
KTYLSIAEAR KNHAELSWND APPAPPLKPG ITTFDRVSLD ELREYIDWTP FFRVWEIHGL
WPAIKSDPHY GEEATKLYDD ANRLLDTMCA DTSSLQARGV AGIFPANSNG DDIEVYTDEE
RTTLRCTLHT LRQQAEQKQA SPNLALADFI APKSSGIKDY IGCFTLTTGH GLQEIMDRFA
EDHDDYHRIM AQALADRLAE AFAEMLHRKV RMELWGYAPD ESLDHDQLIG EKYRGIRPAP
GYPACPDHTE KPKIFDLLNS EAATGVTLTE TFAMNPQASV CGLYFAHPEA KYFILGQIGK
DQVEEYAERK KMTRSEVEKW LAPNLNYTP
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