| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1853 |
|---|
| Symbol | |
|---|
| ID | 6460182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 2025208 |
|---|
| End bp | 2025711 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642725837 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_002016512 |
|---|
| Protein GI | 194334652 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTCC GTGTATTATT TGTCTGTTAT GAAAATATCT GCCGTTCTCC TATGGCGGAA
GGTATTTTTT CGGCTCTCGT CAGGCGCGAT GCACGCGCAG AGGGTATTAT TGTCGAATCG
GCAGGGACGG TATGCTATCA GAAAGGATCT CTTCCGGATA GCCGTGCTGT AATGGTTGCA
GGCAGATATG GCATTGATAT CTCCCCTTTG CGGGCCAGAT GTATCGATGA GCTGGATCTT
GGTTTGTTTG ACTGGATCTT TACCATGGAT GCAGAGAATT ATCAGGATGT TTCGAGCTGT
TTCGCAGGTG CCGGACCGGT GTATATGATG ACGCATTTTG ATCCTTATGC AGCCTGTCAG
GATATCGCTG ATCCCTACTA CGGCAGTGAA GATGATTTTC TGCGGGTCTA TAAGCAGCTT
GATCGGGCCA TAGGGTATGC GTACAGGCAG ATTCTCGGGG GTTTGCATAG CTCGGAATCG
TCTGACATCA ATGGATTTTC ATGA
|
|---|
| Protein sequence | MLLRVLFVCY ENICRSPMAE GIFSALVRRD ARAEGIIVES AGTVCYQKGS LPDSRAVMVA
GRYGIDISPL RARCIDELDL GLFDWIFTMD AENYQDVSSC FAGAGPVYMM THFDPYAACQ
DIADPYYGSE DDFLRVYKQL DRAIGYAYRQ ILGGLHSSES SDINGFS
|
|---|
| |