Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1836 |
Symbol | valS |
ID | 6460223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2004574 |
End bp | 2007282 |
Gene Length | 2709 bp |
Protein Length | 902 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725820 |
Product | valyl-tRNA synthetase |
Protein accession | YP_002016495 |
Protein GI | 194334635 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.66816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.802298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC AGTTATCCAA CGCCAATCTC GATAAAACCT ACAATCATCA TGAGGTGGAG CAGCGCTGGA GCAGTGCCCA CTGGGAATCT CTCGGCATAT ACGAGGCGGA AAGCGCAAGG GTTACAGAGG GTGGAAAAGA GCCCTACACC GTGCTTATGC CGCCGCCGAA CGTTACCGGG AGCCTGACGC TCGGTCATGT TCTCAACCAT ACGTTGCAGG ATATTTTTAT CCGCTATCAG CGAATGCAGG GCAAGGAGGC ACTCTGGCTT CCCGGAACCG ACCACGCCGG CATCGCGACA CAGACCGTTG TTGAAAAAAA GCTTCGCAAA GAGGGGATTT CACGTCATGA TCTCGGTCGG AAGGAGTTTC TCGATCATGT CTGGCAATGG AGGGACGAAT ACGGCGGCCT GATTCTTCGT CAGCTGCGCA AGCTTGGTAT TTCCTGTGAC TGGCGGCGCA ATCTGTTTAC CATGGACGAG AGCGCATCCA TGGCTGTCAA ACACGCCTTT GTGACGCTCT ACCGGGACGG ACTGATCTAC AGGGGCAAGC GCATCATCAA CTGGTGTCCA GTCTCCCAGA CAGCACTCTC CGATGAGGAG GTCATCATGA AGCAGAGAAC GGACAAGCTG GTCTATGTCC GTTATCCCCT TGTCAAAAGG CCTGGAGAGT ATATCACTAT CGCTACCGTC AGGCCTGAAA CAATTCTTGC TGATGTCGCT ATTGCCGTGA ACCCCGATGA CCCGCGTTAT CGGGACCTTG TTGGAGAGCT TGCCGTTGTT CCAGTCGCAG GACGCCATAT ACCTGTTATT GCAGACAGTT ATGTCGATAT CGAGTTCGGG ACAGGCGCAC TGAAGATTAC CCCGGCCCAT GACCCCAATG ACTATGACGT CGCAGAGCGT CATAACCTGC CGCTTATCAG TGTTGTCGGA CGTGACGGTC ATATGATTGA CGACTTCGGT TACAAGGGGA TGGACCGTTT TGATGCCAGG GAGAAAATTA TCGTTGATCT TGAAGAACGA GGCAGTCTGG TCAAAGTCGA GGAGTATGAG CACAATGTCG GCTATTCCGA GCGTGCAGAC GTTGTCGTTG AGCCGTATCT TTCCGAGCAG TGGTTTGTCA GGATGAAACC CCTTGCCGAA AAGGCTCTTG ATGCTGTCAA TGACGGCCAG ATCACCTTCC ACCCTTCCCA CTGGATCAGC ACCTACCGTC ACTGGATGGA AAACATTCAG GACTGGTGCA TTTCGAGGCA GTTGTGGTGG GGGCACAGGA TCCCCGCCTG GTACGATACC GAAGGAAAGA TATGGGTTGC CGGTTCCTAT GAAGAGGCTT GCCATCTTGC CGGTACCGAC AAGCTTGTTC AGGATGAGGA TGTGCTCGAT ACCTGGTTCT CATCATGGCT CTGGCCGATG ACGACGCTTG GCTGGACAGG CGGCCACCAG GAAAACGATG ATCTCAAATC GTTTTATCCC ACCAGCACCC TGGTGACCGG GCCTGATATC ATTTTCTTCT GGGTGGCGAG AATGATCATG GCAGGGATCT ATTTCAACGG TGATATTCCC TTCCGCGATG TCTACTTTAC CAGTATCATT CGCGATATGA AAGGGCGCAA GCTCTCCAAG TCGCTTGGCA ATTCGCCCGA TCCGCTCAAG GTGATCGATA CCTACGGTAC CGATGCCCTG CGTTTTACCA TCGTCTATAT CGCGCCGCTT GGCCAGGATG TGCTGTTCGG AGAGGAAAAG TGCGAACTGG GCCGCAATTT CGCCACCAAA ATCTGGAACG CCACCCGGCT GGTCTTCATG CAGCGGGAAA AGGTGTTCGA TGATATGGAT AGTTTCCGCC ATGCCTATGA AGCTTTCAGC TTCGACAGCC TGTCGATCCA GGGGGCGGAT CGATGGATTC TCGGTCGTTA CCACAGGATG CTTGAAGCCT ATCATCATGC GTTTGCCCAG TTCCGCCTCA ACGATATCGT CAAGATTATC TATGACTTTT TCAGGGGGGA CTACTGCGAC TGGTATCTCG AAGCGCTGAA AGTCGAGCTG GCGGGCTCCT CTCACGACGA GGCAGCCGAT CGGGTCTGTC TTGCGGTATC GATCCTCGAA GGAGTGCTCA AGGTCCTGCA CCCTGTCATG CCGTTTCTCA CCGATGAGAT CTGGCACCAT ATTATTGATC GGCCTCTTGA CAGGAGTATT GCCAAGACCG CTATGCCGCA CCCTGACCCG CTCCTGGTTC AGGAAGATAT TTCAGCCTTC ACCCTGGTAC AGAGTATCAT TTCAGAAACC CGCAGTATCA GGGCGCTGTT CAGCGTTCCC CACGATATGC AAGCCGATCT TGTTATCAGA AGCTCTGAAA GTGAGGCGAT CCTCTGTTTC AACCAGTTCA GCGAGATTAT CTCATCATTG ACGAAATGCC GTGTTTCTAT TACGGAAAAT GGTGAGCGCC CCCCCTCTTC GGCTGGCGCC GTCGTGGAAG GGCATGAACT TTTTATGCCT TTGAAGGGGT TGATATCCTT CGAGAAGGAG AAGGTCAGGC TTGAAAAGGA AATTTCGAAT GTTTCGGGAT ATGTGACCCG ACTTGAGAAG AAACTTTCCA ATCGGGGTTT TGTCGATAAT GCTCCTCAGG ATGTGGTACA GAGCGAGAAG GAAAAACTTG CCGAAGCCGC TGCGAGCCTC AGTAAGTTAA AGGCAAACAT GGATGTGCTC TCAGAATAA
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Protein sequence | MSDQLSNANL DKTYNHHEVE QRWSSAHWES LGIYEAESAR VTEGGKEPYT VLMPPPNVTG SLTLGHVLNH TLQDIFIRYQ RMQGKEALWL PGTDHAGIAT QTVVEKKLRK EGISRHDLGR KEFLDHVWQW RDEYGGLILR QLRKLGISCD WRRNLFTMDE SASMAVKHAF VTLYRDGLIY RGKRIINWCP VSQTALSDEE VIMKQRTDKL VYVRYPLVKR PGEYITIATV RPETILADVA IAVNPDDPRY RDLVGELAVV PVAGRHIPVI ADSYVDIEFG TGALKITPAH DPNDYDVAER HNLPLISVVG RDGHMIDDFG YKGMDRFDAR EKIIVDLEER GSLVKVEEYE HNVGYSERAD VVVEPYLSEQ WFVRMKPLAE KALDAVNDGQ ITFHPSHWIS TYRHWMENIQ DWCISRQLWW GHRIPAWYDT EGKIWVAGSY EEACHLAGTD KLVQDEDVLD TWFSSWLWPM TTLGWTGGHQ ENDDLKSFYP TSTLVTGPDI IFFWVARMIM AGIYFNGDIP FRDVYFTSII RDMKGRKLSK SLGNSPDPLK VIDTYGTDAL RFTIVYIAPL GQDVLFGEEK CELGRNFATK IWNATRLVFM QREKVFDDMD SFRHAYEAFS FDSLSIQGAD RWILGRYHRM LEAYHHAFAQ FRLNDIVKII YDFFRGDYCD WYLEALKVEL AGSSHDEAAD RVCLAVSILE GVLKVLHPVM PFLTDEIWHH IIDRPLDRSI AKTAMPHPDP LLVQEDISAF TLVQSIISET RSIRALFSVP HDMQADLVIR SSESEAILCF NQFSEIISSL TKCRVSITEN GERPPSSAGA VVEGHELFMP LKGLISFEKE KVRLEKEISN VSGYVTRLEK KLSNRGFVDN APQDVVQSEK EKLAEAAASL SKLKANMDVL SE
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