Gene Paes_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1836 
SymbolvalS 
ID6460223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp2004574 
End bp2007282 
Gene Length2709 bp 
Protein Length902 aa 
Translation table11 
GC content53% 
IMG OID642725820 
Productvalyl-tRNA synthetase 
Protein accessionYP_002016495 
Protein GI194334635 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.66816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.802298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC AGTTATCCAA CGCCAATCTC GATAAAACCT ACAATCATCA TGAGGTGGAG 
CAGCGCTGGA GCAGTGCCCA CTGGGAATCT CTCGGCATAT ACGAGGCGGA AAGCGCAAGG
GTTACAGAGG GTGGAAAAGA GCCCTACACC GTGCTTATGC CGCCGCCGAA CGTTACCGGG
AGCCTGACGC TCGGTCATGT TCTCAACCAT ACGTTGCAGG ATATTTTTAT CCGCTATCAG
CGAATGCAGG GCAAGGAGGC ACTCTGGCTT CCCGGAACCG ACCACGCCGG CATCGCGACA
CAGACCGTTG TTGAAAAAAA GCTTCGCAAA GAGGGGATTT CACGTCATGA TCTCGGTCGG
AAGGAGTTTC TCGATCATGT CTGGCAATGG AGGGACGAAT ACGGCGGCCT GATTCTTCGT
CAGCTGCGCA AGCTTGGTAT TTCCTGTGAC TGGCGGCGCA ATCTGTTTAC CATGGACGAG
AGCGCATCCA TGGCTGTCAA ACACGCCTTT GTGACGCTCT ACCGGGACGG ACTGATCTAC
AGGGGCAAGC GCATCATCAA CTGGTGTCCA GTCTCCCAGA CAGCACTCTC CGATGAGGAG
GTCATCATGA AGCAGAGAAC GGACAAGCTG GTCTATGTCC GTTATCCCCT TGTCAAAAGG
CCTGGAGAGT ATATCACTAT CGCTACCGTC AGGCCTGAAA CAATTCTTGC TGATGTCGCT
ATTGCCGTGA ACCCCGATGA CCCGCGTTAT CGGGACCTTG TTGGAGAGCT TGCCGTTGTT
CCAGTCGCAG GACGCCATAT ACCTGTTATT GCAGACAGTT ATGTCGATAT CGAGTTCGGG
ACAGGCGCAC TGAAGATTAC CCCGGCCCAT GACCCCAATG ACTATGACGT CGCAGAGCGT
CATAACCTGC CGCTTATCAG TGTTGTCGGA CGTGACGGTC ATATGATTGA CGACTTCGGT
TACAAGGGGA TGGACCGTTT TGATGCCAGG GAGAAAATTA TCGTTGATCT TGAAGAACGA
GGCAGTCTGG TCAAAGTCGA GGAGTATGAG CACAATGTCG GCTATTCCGA GCGTGCAGAC
GTTGTCGTTG AGCCGTATCT TTCCGAGCAG TGGTTTGTCA GGATGAAACC CCTTGCCGAA
AAGGCTCTTG ATGCTGTCAA TGACGGCCAG ATCACCTTCC ACCCTTCCCA CTGGATCAGC
ACCTACCGTC ACTGGATGGA AAACATTCAG GACTGGTGCA TTTCGAGGCA GTTGTGGTGG
GGGCACAGGA TCCCCGCCTG GTACGATACC GAAGGAAAGA TATGGGTTGC CGGTTCCTAT
GAAGAGGCTT GCCATCTTGC CGGTACCGAC AAGCTTGTTC AGGATGAGGA TGTGCTCGAT
ACCTGGTTCT CATCATGGCT CTGGCCGATG ACGACGCTTG GCTGGACAGG CGGCCACCAG
GAAAACGATG ATCTCAAATC GTTTTATCCC ACCAGCACCC TGGTGACCGG GCCTGATATC
ATTTTCTTCT GGGTGGCGAG AATGATCATG GCAGGGATCT ATTTCAACGG TGATATTCCC
TTCCGCGATG TCTACTTTAC CAGTATCATT CGCGATATGA AAGGGCGCAA GCTCTCCAAG
TCGCTTGGCA ATTCGCCCGA TCCGCTCAAG GTGATCGATA CCTACGGTAC CGATGCCCTG
CGTTTTACCA TCGTCTATAT CGCGCCGCTT GGCCAGGATG TGCTGTTCGG AGAGGAAAAG
TGCGAACTGG GCCGCAATTT CGCCACCAAA ATCTGGAACG CCACCCGGCT GGTCTTCATG
CAGCGGGAAA AGGTGTTCGA TGATATGGAT AGTTTCCGCC ATGCCTATGA AGCTTTCAGC
TTCGACAGCC TGTCGATCCA GGGGGCGGAT CGATGGATTC TCGGTCGTTA CCACAGGATG
CTTGAAGCCT ATCATCATGC GTTTGCCCAG TTCCGCCTCA ACGATATCGT CAAGATTATC
TATGACTTTT TCAGGGGGGA CTACTGCGAC TGGTATCTCG AAGCGCTGAA AGTCGAGCTG
GCGGGCTCCT CTCACGACGA GGCAGCCGAT CGGGTCTGTC TTGCGGTATC GATCCTCGAA
GGAGTGCTCA AGGTCCTGCA CCCTGTCATG CCGTTTCTCA CCGATGAGAT CTGGCACCAT
ATTATTGATC GGCCTCTTGA CAGGAGTATT GCCAAGACCG CTATGCCGCA CCCTGACCCG
CTCCTGGTTC AGGAAGATAT TTCAGCCTTC ACCCTGGTAC AGAGTATCAT TTCAGAAACC
CGCAGTATCA GGGCGCTGTT CAGCGTTCCC CACGATATGC AAGCCGATCT TGTTATCAGA
AGCTCTGAAA GTGAGGCGAT CCTCTGTTTC AACCAGTTCA GCGAGATTAT CTCATCATTG
ACGAAATGCC GTGTTTCTAT TACGGAAAAT GGTGAGCGCC CCCCCTCTTC GGCTGGCGCC
GTCGTGGAAG GGCATGAACT TTTTATGCCT TTGAAGGGGT TGATATCCTT CGAGAAGGAG
AAGGTCAGGC TTGAAAAGGA AATTTCGAAT GTTTCGGGAT ATGTGACCCG ACTTGAGAAG
AAACTTTCCA ATCGGGGTTT TGTCGATAAT GCTCCTCAGG ATGTGGTACA GAGCGAGAAG
GAAAAACTTG CCGAAGCCGC TGCGAGCCTC AGTAAGTTAA AGGCAAACAT GGATGTGCTC
TCAGAATAA
 
Protein sequence
MSDQLSNANL DKTYNHHEVE QRWSSAHWES LGIYEAESAR VTEGGKEPYT VLMPPPNVTG 
SLTLGHVLNH TLQDIFIRYQ RMQGKEALWL PGTDHAGIAT QTVVEKKLRK EGISRHDLGR
KEFLDHVWQW RDEYGGLILR QLRKLGISCD WRRNLFTMDE SASMAVKHAF VTLYRDGLIY
RGKRIINWCP VSQTALSDEE VIMKQRTDKL VYVRYPLVKR PGEYITIATV RPETILADVA
IAVNPDDPRY RDLVGELAVV PVAGRHIPVI ADSYVDIEFG TGALKITPAH DPNDYDVAER
HNLPLISVVG RDGHMIDDFG YKGMDRFDAR EKIIVDLEER GSLVKVEEYE HNVGYSERAD
VVVEPYLSEQ WFVRMKPLAE KALDAVNDGQ ITFHPSHWIS TYRHWMENIQ DWCISRQLWW
GHRIPAWYDT EGKIWVAGSY EEACHLAGTD KLVQDEDVLD TWFSSWLWPM TTLGWTGGHQ
ENDDLKSFYP TSTLVTGPDI IFFWVARMIM AGIYFNGDIP FRDVYFTSII RDMKGRKLSK
SLGNSPDPLK VIDTYGTDAL RFTIVYIAPL GQDVLFGEEK CELGRNFATK IWNATRLVFM
QREKVFDDMD SFRHAYEAFS FDSLSIQGAD RWILGRYHRM LEAYHHAFAQ FRLNDIVKII
YDFFRGDYCD WYLEALKVEL AGSSHDEAAD RVCLAVSILE GVLKVLHPVM PFLTDEIWHH
IIDRPLDRSI AKTAMPHPDP LLVQEDISAF TLVQSIISET RSIRALFSVP HDMQADLVIR
SSESEAILCF NQFSEIISSL TKCRVSITEN GERPPSSAGA VVEGHELFMP LKGLISFEKE
KVRLEKEISN VSGYVTRLEK KLSNRGFVDN APQDVVQSEK EKLAEAAASL SKLKANMDVL
SE