Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1835 |
Symbol | |
ID | 6460224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 2003541 |
End bp | 2004440 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642725819 |
Product | RNA polymerase, sigma 32 subunit, RpoH |
Protein accession | YP_002016494 |
Protein GI | 194334634 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.885332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCAAC TAAAAATCAG TAAACAGATC ACCAATCGTG AGAGTTTATC TCTTGATCGG TATCTGCAGG AGATCGGCAA ATACGAGCTG CTGACAGCGG AAGATGAGGT CAAACTGACC ATGGCGATCA AGGAAGGATA TGACATGCCG GTCGATACTC CTGAGTACAA GCGAGCAAAG AGAGCGCTCG ATAAGCTGAT CAAGGGAAAT CTTCGCTTTG TTGTATCAGT AGCCAAACAG TATCAGAATC AGGGTTTAAC TCTTGGTGAT CTTATCAATG AGGGAAACCT CGGCCTGATC AAGGCAGCAA AACGTTTTGA TGAGACCCGT GGCTTTAAAT TTATTTCCTA TGCTGTCTGG TGGATCAGGC AGTCAATTCT TCAGGCTCTT GCCGAACAGT CGAGAATTGT GCGTCTTCCT TTAAACAGGG TAGGGACGCT CAACAAGATC AGCAAGGCAT ACAGTCAGCT TGAACAGGAG TTTGAGCGGG ATCCCAATAC CAAGGAACTT GCCACTGTGC TCGACATGGA CTCACAGGAT GTTGCCGATA CGCTCAAGAT CGCCGGCCGT CATGTCTCTG TCGATGCCCC TTTTGCCCAG GGAGATGATA ACCGTCTGCT CGATGTGCTT CAGCATGACG GACAGAAACC AGATCATGGA CTGACCCGCG ATTCTCTTAC CCTTGAGGTT GAGCGTTCTC TCTCGGTCCT GGCTCCCCGT GAAGCTGACG TTATCCGTTC CTATTTCGGG ATCGGTATGG AAAACCCGCT TACGCTGGAA GAGATCGGTG AGAAATTCAA ACTTACCCGT GAAAGAGTCC GTCAGATCAA GGAAAAAGCC ATCAGAAGAT TGCGCCAGTC AGCCTATAGT AAAGTTCTCA AGGAGTACAT CGGCAGTTAG
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Protein sequence | MRQLKISKQI TNRESLSLDR YLQEIGKYEL LTAEDEVKLT MAIKEGYDMP VDTPEYKRAK RALDKLIKGN LRFVVSVAKQ YQNQGLTLGD LINEGNLGLI KAAKRFDETR GFKFISYAVW WIRQSILQAL AEQSRIVRLP LNRVGTLNKI SKAYSQLEQE FERDPNTKEL ATVLDMDSQD VADTLKIAGR HVSVDAPFAQ GDDNRLLDVL QHDGQKPDHG LTRDSLTLEV ERSLSVLAPR EADVIRSYFG IGMENPLTLE EIGEKFKLTR ERVRQIKEKA IRRLRQSAYS KVLKEYIGS
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